Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 51022-5-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1185 | 1.721e-02 | 6.776e-03 | 8.935e-02 |
|---|
| IPC-NIBC-129 | 0.2314 | 8.167e-02 | 6.992e-02 | 3.679e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2208 | 1.723e-02 | 1.153e-02 | 1.985e-01 |
|---|
| Loi_GPL570 | 0.2341 | 8.342e-02 | 1.061e-01 | 3.328e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1856 | 7.068e-02 | 6.363e-02 | 6.964e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3163 | 2.978e-01 | 2.201e-01 | 8.453e-01 |
|---|
| Schmidt | 0.2242 | 4.438e-02 | 4.656e-02 | 2.576e-01 |
|---|
| Sotiriou | 0.2338 | 8.030e-02 | 3.060e-02 | 4.984e-01 |
|---|
| Wang | 0.1715 | 7.787e-02 | 6.151e-02 | 2.513e-01 |
|---|
| Zhang | 0.1508 | 8.179e-03 | 4.067e-03 | 3.964e-02 |
|---|
Expression data for subnetwork 51022-5-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 51022-5-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| txn |   | 2 | 53 | 232 | 216 | 0.052 | 0.168 | 0.117 | 0.209 | 0.171 | 0.246 | 0.161 | 0.168 | 0.115 | 0.132 |
|---|
| rrm2 | | 5 | 20 | 35 | 25 | 0.131 | 0.207 | 0.227 | 0.187 | 0.161 | 0.303 | 0.190 | 0.219 | 0.117 | 0.129 |
|---|
| glrx2 | | 2 | 53 | 232 | 216 | 0.038 | 0.231 | 0.122 | 0.021 | 0.152 | 0.284 | 0.131 | 0.171 | 0.127 | 0.070 |
|---|
| txnrd1 | | 2 | 53 | 232 | 216 | 0.090 | 0.133 | 0.124 | 0.256 | 0.156 | 0.101 | 0.169 | 0.142 | 0.155 | 0.118 |
|---|
GO Enrichment output for subnetwork 51022-5-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 |  | 4.491E-10 | 1.033E-06 |
|---|
| cell redox homeostasis | GO:0045454 | | 6.268E-10 | 7.208E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 7.858E-10 | 6.025E-07 |
|---|
| protein oligomerization | GO:0051259 | | 2.596E-09 | 1.493E-06 |
|---|
| electron transport chain | GO:0022900 | | 1.166E-08 | 5.364E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 2.981E-08 | 1.143E-05 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 8.181E-08 | 2.688E-05 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.597E-07 | 4.592E-05 |
|---|
| protein thiol-disulfide exchange | GO:0006467 | | 9.812E-07 | 2.508E-04 |
|---|
| protein heterooligomerization | GO:0051291 | | 2.06E-06 | 4.738E-04 |
|---|
| response to oxidative stress | GO:0006979 | | 2.976E-06 | 6.223E-04 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cell redox homeostasis | GO:0045454 | | 3.273E-16 | 7.997E-13 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 1.235E-14 | 1.508E-11 |
|---|
| response to reactive oxygen species | GO:0000302 | | 4.816E-14 | 3.922E-11 |
|---|
| cellular response to hydrogen peroxide | GO:0070301 | | 2.038E-12 | 1.245E-09 |
|---|
| cellular response to reactive oxygen species | GO:0034614 | | 4.655E-12 | 2.274E-09 |
|---|
| hydrogen peroxide metabolic process | GO:0042743 | | 7.857E-12 | 3.199E-09 |
|---|
| cellular response to oxidative stress | GO:0034599 | | 9.223E-12 | 3.219E-09 |
|---|
| mesoderm formation | GO:0001707 | | 1.889E-11 | 5.769E-09 |
|---|
| formation of primary germ layer | GO:0001704 | | 2.436E-11 | 6.613E-09 |
|---|
| mesoderm morphogenesis | GO:0048332 | | 2.75E-11 | 6.719E-09 |
|---|
| gastrulation | GO:0007369 | | 2.225E-10 | 4.942E-08 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cell redox homeostasis | GO:0045454 | | 7.732E-13 | 1.86E-09 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 3.664E-11 | 4.408E-08 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.14E-10 | 9.14E-08 |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 2.69E-10 | 1.618E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 6.454E-10 | 3.106E-07 |
|---|
| protein oligomerization | GO:0051259 | | 1.448E-09 | 5.807E-07 |
|---|
| cellular response to hydrogen peroxide | GO:0070301 | | 6.264E-09 | 2.153E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 1.182E-08 | 3.554E-06 |
|---|
| cellular response to reactive oxygen species | GO:0034614 | | 1.182E-08 | 3.159E-06 |
|---|
| hydrogen peroxide metabolic process | GO:0042743 | | 1.764E-08 | 4.245E-06 |
|---|
| cellular response to oxidative stress | GO:0034599 | | 1.994E-08 | 4.362E-06 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cell redox homeostasis | GO:0045454 | | 3.273E-16 | 7.997E-13 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 1.235E-14 | 1.508E-11 |
|---|
| response to reactive oxygen species | GO:0000302 | | 4.816E-14 | 3.922E-11 |
|---|
| cellular response to hydrogen peroxide | GO:0070301 | | 2.038E-12 | 1.245E-09 |
|---|
| cellular response to reactive oxygen species | GO:0034614 | | 4.655E-12 | 2.274E-09 |
|---|
| hydrogen peroxide metabolic process | GO:0042743 | | 7.857E-12 | 3.199E-09 |
|---|
| cellular response to oxidative stress | GO:0034599 | | 9.223E-12 | 3.219E-09 |
|---|
| mesoderm formation | GO:0001707 | | 1.889E-11 | 5.769E-09 |
|---|
| formation of primary germ layer | GO:0001704 | | 2.436E-11 | 6.613E-09 |
|---|
| mesoderm morphogenesis | GO:0048332 | | 2.75E-11 | 6.719E-09 |
|---|
| gastrulation | GO:0007369 | | 2.225E-10 | 4.942E-08 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cell redox homeostasis | GO:0045454 | | 7.732E-13 | 1.86E-09 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 3.664E-11 | 4.408E-08 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.14E-10 | 9.14E-08 |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 2.69E-10 | 1.618E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 6.454E-10 | 3.106E-07 |
|---|
| protein oligomerization | GO:0051259 | | 1.448E-09 | 5.807E-07 |
|---|
| cellular response to hydrogen peroxide | GO:0070301 | | 6.264E-09 | 2.153E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 1.182E-08 | 3.554E-06 |
|---|
| cellular response to reactive oxygen species | GO:0034614 | | 1.182E-08 | 3.159E-06 |
|---|
| hydrogen peroxide metabolic process | GO:0042743 | | 1.764E-08 | 4.245E-06 |
|---|
| cellular response to oxidative stress | GO:0034599 | | 1.994E-08 | 4.362E-06 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cell redox homeostasis | GO:0045454 | | 7.732E-13 | 1.86E-09 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 3.664E-11 | 4.408E-08 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.14E-10 | 9.14E-08 |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 2.69E-10 | 1.618E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 6.454E-10 | 3.106E-07 |
|---|
| protein oligomerization | GO:0051259 | | 1.448E-09 | 5.807E-07 |
|---|
| cellular response to hydrogen peroxide | GO:0070301 | | 6.264E-09 | 2.153E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 1.182E-08 | 3.554E-06 |
|---|
| cellular response to reactive oxygen species | GO:0034614 | | 1.182E-08 | 3.159E-06 |
|---|
| hydrogen peroxide metabolic process | GO:0042743 | | 1.764E-08 | 4.245E-06 |
|---|
| cellular response to oxidative stress | GO:0034599 | | 1.994E-08 | 4.362E-06 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 4.491E-10 | 1.033E-06 |
|---|
| cell redox homeostasis | GO:0045454 | | 6.268E-10 | 7.208E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 7.858E-10 | 6.025E-07 |
|---|
| protein oligomerization | GO:0051259 | | 2.596E-09 | 1.493E-06 |
|---|
| electron transport chain | GO:0022900 | | 1.166E-08 | 5.364E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 2.981E-08 | 1.143E-05 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 8.181E-08 | 2.688E-05 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.597E-07 | 4.592E-05 |
|---|
| protein thiol-disulfide exchange | GO:0006467 | | 9.812E-07 | 2.508E-04 |
|---|
| protein heterooligomerization | GO:0051291 | | 2.06E-06 | 4.738E-04 |
|---|
| response to oxidative stress | GO:0006979 | | 2.976E-06 | 6.223E-04 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 4.491E-10 | 1.033E-06 |
|---|
| cell redox homeostasis | GO:0045454 | | 6.268E-10 | 7.208E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 7.858E-10 | 6.025E-07 |
|---|
| protein oligomerization | GO:0051259 | | 2.596E-09 | 1.493E-06 |
|---|
| electron transport chain | GO:0022900 | | 1.166E-08 | 5.364E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 2.981E-08 | 1.143E-05 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 8.181E-08 | 2.688E-05 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.597E-07 | 4.592E-05 |
|---|
| protein thiol-disulfide exchange | GO:0006467 | | 9.812E-07 | 2.508E-04 |
|---|
| protein heterooligomerization | GO:0051291 | | 2.06E-06 | 4.738E-04 |
|---|
| response to oxidative stress | GO:0006979 | | 2.976E-06 | 6.223E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 4.491E-10 | 1.033E-06 |
|---|
| cell redox homeostasis | GO:0045454 | | 6.268E-10 | 7.208E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 7.858E-10 | 6.025E-07 |
|---|
| protein oligomerization | GO:0051259 | | 2.596E-09 | 1.493E-06 |
|---|
| electron transport chain | GO:0022900 | | 1.166E-08 | 5.364E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 2.981E-08 | 1.143E-05 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 8.181E-08 | 2.688E-05 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.597E-07 | 4.592E-05 |
|---|
| protein thiol-disulfide exchange | GO:0006467 | | 9.812E-07 | 2.508E-04 |
|---|
| protein heterooligomerization | GO:0051291 | | 2.06E-06 | 4.738E-04 |
|---|
| response to oxidative stress | GO:0006979 | | 2.976E-06 | 6.223E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| deoxyribonucleotide biosynthetic process | GO:0009263 | | 4.491E-10 | 1.033E-06 |
|---|
| cell redox homeostasis | GO:0045454 | | 6.268E-10 | 7.208E-07 |
|---|
| nucleoside diphosphate metabolic process | GO:0009132 | | 7.858E-10 | 6.025E-07 |
|---|
| protein oligomerization | GO:0051259 | | 2.596E-09 | 1.493E-06 |
|---|
| electron transport chain | GO:0022900 | | 1.166E-08 | 5.364E-06 |
|---|
| deoxyribonucleotide metabolic process | GO:0009262 | | 2.981E-08 | 1.143E-05 |
|---|
| response to hydrogen peroxide | GO:0042542 | | 8.181E-08 | 2.688E-05 |
|---|
| response to reactive oxygen species | GO:0000302 | | 1.597E-07 | 4.592E-05 |
|---|
| protein thiol-disulfide exchange | GO:0006467 | | 9.812E-07 | 2.508E-04 |
|---|
| protein heterooligomerization | GO:0051291 | | 2.06E-06 | 4.738E-04 |
|---|
| response to oxidative stress | GO:0006979 | | 2.976E-06 | 6.223E-04 |
|---|
