Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 29924-4-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1047 | 1.500e-02 | 5.619e-03 | 8.024e-02 |
|---|
| IPC-NIBC-129 | 0.2792 | 7.278e-02 | 6.135e-02 | 3.342e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2274 | 6.621e-03 | 3.739e-03 | 8.521e-02 |
|---|
| Loi_GPL570 | 0.2433 | 9.644e-02 | 1.212e-01 | 3.696e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1817 | 1.141e-01 | 1.158e-01 | 8.473e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3211 | 9.112e-02 | 4.832e-02 | 4.677e-01 |
|---|
| Schmidt | 0.2132 | 2.372e-02 | 2.524e-02 | 1.552e-01 |
|---|
| Sotiriou | 0.2736 | 8.544e-02 | 3.343e-02 | 5.178e-01 |
|---|
| Wang | 0.1326 | 1.501e-01 | 1.391e-01 | 4.005e-01 |
|---|
| Zhang | 0.2634 | 7.545e-03 | 3.716e-03 | 3.710e-02 |
|---|
Expression data for subnetwork 29924-4-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 29924-4-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| tsc1 |   | 31 | 5 | 26 | 15 | 0.049 | 0.012 | -0.055 | 0.072 | 0.055 | -0.196 | 0.006 | 0.010 | 0.043 | -0.007 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| epn1 | | 1 | 90 | 160 | 170 | 0.027 | 0.053 | 0.000 | 0.154 | 0.068 | 0.137 | 0.178 | 0.065 | -0.026 | 0.148 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
GO Enrichment output for subnetwork 29924-4-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 8.025E-07 | 1.846E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.431E-07 | 9.696E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.734E-07 | 7.463E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.734E-07 | 5.597E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.812E-07 | 4.514E-04 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 9.812E-07 | 3.761E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.167E-06 | 3.834E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.273E-06 | 3.659E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.503E-06 | 3.841E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 1.827E-06 | 4.203E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.06E-06 | 4.307E-04 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.121E-07 | 1.74E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.959E-07 | 9.722E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.32E-07 | 6.775E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.466E-07 | 5.782E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.466E-07 | 4.625E-04 |
|---|
| response to pheromone | GO:0019236 | | 1.068E-06 | 4.348E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.068E-06 | 3.727E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.16E-06 | 3.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.254E-06 | 3.404E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.51E-06 | 3.688E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 1.993E-06 | 4.426E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.918E-07 | 2.386E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 9.918E-07 | 1.193E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.306E-06 | 1.048E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.365E-06 | 8.212E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.553E-06 | 7.474E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.553E-06 | 6.229E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.903E-06 | 6.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.057E-06 | 6.187E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.476E-06 | 6.62E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.775E-06 | 6.678E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.367E-06 | 7.365E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.121E-07 | 1.74E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.959E-07 | 9.722E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.32E-07 | 6.775E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.466E-07 | 5.782E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.466E-07 | 4.625E-04 |
|---|
| response to pheromone | GO:0019236 | | 1.068E-06 | 4.348E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.068E-06 | 3.727E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.16E-06 | 3.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.254E-06 | 3.404E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.51E-06 | 3.688E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 1.993E-06 | 4.426E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.918E-07 | 2.386E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 9.918E-07 | 1.193E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.306E-06 | 1.048E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.365E-06 | 8.212E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.553E-06 | 7.474E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.553E-06 | 6.229E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.903E-06 | 6.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.057E-06 | 6.187E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.476E-06 | 6.62E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.775E-06 | 6.678E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.367E-06 | 7.365E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.918E-07 | 2.386E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 9.918E-07 | 1.193E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.306E-06 | 1.048E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.365E-06 | 8.212E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.553E-06 | 7.474E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.553E-06 | 6.229E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.903E-06 | 6.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.057E-06 | 6.187E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.476E-06 | 6.62E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.775E-06 | 6.678E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.367E-06 | 7.365E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.025E-07 | 1.846E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.431E-07 | 9.696E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.734E-07 | 7.463E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.734E-07 | 5.597E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.812E-07 | 4.514E-04 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 9.812E-07 | 3.761E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.167E-06 | 3.834E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.273E-06 | 3.659E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.503E-06 | 3.841E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 1.827E-06 | 4.203E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.06E-06 | 4.307E-04 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.025E-07 | 1.846E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.431E-07 | 9.696E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.734E-07 | 7.463E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.734E-07 | 5.597E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.812E-07 | 4.514E-04 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 9.812E-07 | 3.761E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.167E-06 | 3.834E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.273E-06 | 3.659E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.503E-06 | 3.841E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 1.827E-06 | 4.203E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.06E-06 | 4.307E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.025E-07 | 1.846E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.431E-07 | 9.696E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.734E-07 | 7.463E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.734E-07 | 5.597E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.812E-07 | 4.514E-04 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 9.812E-07 | 3.761E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.167E-06 | 3.834E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.273E-06 | 3.659E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.503E-06 | 3.841E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 1.827E-06 | 4.203E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.06E-06 | 4.307E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.025E-07 | 1.846E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.431E-07 | 9.696E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.734E-07 | 7.463E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.734E-07 | 5.597E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.812E-07 | 4.514E-04 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 9.812E-07 | 3.761E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.167E-06 | 3.834E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.273E-06 | 3.659E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.503E-06 | 3.841E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 1.827E-06 | 4.203E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.06E-06 | 4.307E-04 |
|---|
