Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 29107-3-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1443 | 1.879e-02 | 7.636e-03 | 9.568e-02 |
|---|
| IPC-NIBC-129 | 0.1853 | 9.167e-02 | 7.969e-02 | 4.037e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2166 | 4.280e-02 | 3.340e-02 | 3.940e-01 |
|---|
| Loi_GPL570 | 0.2249 | 1.122e-01 | 1.392e-01 | 4.110e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2232 | 2.759e-02 | 1.890e-02 | 3.676e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3386 | 9.017e-02 | 4.767e-02 | 4.645e-01 |
|---|
| Schmidt | 0.2017 | 3.160e-02 | 3.341e-02 | 1.968e-01 |
|---|
| Sotiriou | 0.2554 | 4.351e-02 | 1.274e-02 | 3.280e-01 |
|---|
| Wang | 0.1786 | 6.904e-02 | 5.283e-02 | 2.299e-01 |
|---|
| Zhang | 0.2644 | 5.613e-03 | 2.671e-03 | 2.906e-02 |
|---|
Expression data for subnetwork 29107-3-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 29107-3-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| cdc2 |   | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| xpo1 | | 3 | 39 | 161 | 141 | 0.020 | 0.153 | 0.081 | 0.020 | 0.092 | 0.101 | 0.194 | 0.104 | 0.140 | 0.090 |
|---|
| nxt1 | | 1 | 90 | 161 | 171 | -0.038 | 0.152 | 0.020 | 0.311 | 0.059 | 0.163 | 0.148 | -0.098 | 0.080 | 0.026 |
|---|
| top2a | | 22 | 7 | 70 | 46 | 0.147 | 0.183 | 0.185 | 0.100 | 0.206 | 0.309 | 0.261 | 0.183 | 0.072 | 0.234 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 29107-3-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 |  | 1.033E-07 | 2.376E-04 |
|---|
| nuclear export | GO:0051168 | | 3.156E-06 | 3.63E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.596E-06 | 2.068E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.392E-06 | 2.48E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 2.506E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 2.257E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 2.169E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 7.924E-06 | 2.025E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 7.924E-06 | 1.823E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 9.492E-06 | 1.985E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 7.219E-08 | 1.764E-04 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 1.898E-06 | 2.319E-03 |
|---|
| nuclear export | GO:0051168 | | 2.396E-06 | 1.951E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.847E-06 | 1.739E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 3.684E-06 | 1.8E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 3.85E-06 | 1.568E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 4.379E-06 | 1.528E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 4.379E-06 | 1.337E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 5.311E-06 | 1.442E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.311E-06 | 1.297E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 5.364E-06 | 1.191E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 9.639E-08 | 2.319E-04 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.313E-06 | 2.783E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.313E-06 | 1.855E-03 |
|---|
| nuclear export | GO:0051168 | | 2.582E-06 | 1.553E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.913E-06 | 2.364E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.134E-06 | 2.059E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.839E-06 | 2.007E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.839E-06 | 1.756E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.472E-06 | 1.73E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.472E-06 | 1.557E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 7.151E-06 | 1.564E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 7.219E-08 | 1.764E-04 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 1.898E-06 | 2.319E-03 |
|---|
| nuclear export | GO:0051168 | | 2.396E-06 | 1.951E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.847E-06 | 1.739E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 3.684E-06 | 1.8E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 3.85E-06 | 1.568E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 4.379E-06 | 1.528E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 4.379E-06 | 1.337E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 5.311E-06 | 1.442E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.311E-06 | 1.297E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 5.364E-06 | 1.191E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 9.639E-08 | 2.319E-04 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.313E-06 | 2.783E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.313E-06 | 1.855E-03 |
|---|
| nuclear export | GO:0051168 | | 2.582E-06 | 1.553E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.913E-06 | 2.364E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.134E-06 | 2.059E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.839E-06 | 2.007E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.839E-06 | 1.756E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.472E-06 | 1.73E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.472E-06 | 1.557E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 7.151E-06 | 1.564E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 9.639E-08 | 2.319E-04 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.313E-06 | 2.783E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.313E-06 | 1.855E-03 |
|---|
| nuclear export | GO:0051168 | | 2.582E-06 | 1.553E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.913E-06 | 2.364E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.134E-06 | 2.059E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.839E-06 | 2.007E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.839E-06 | 1.756E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.472E-06 | 1.73E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.472E-06 | 1.557E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 7.151E-06 | 1.564E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 1.033E-07 | 2.376E-04 |
|---|
| nuclear export | GO:0051168 | | 3.156E-06 | 3.63E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.596E-06 | 2.068E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.392E-06 | 2.48E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 2.506E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 2.257E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 2.169E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 7.924E-06 | 2.025E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 7.924E-06 | 1.823E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 9.492E-06 | 1.985E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 1.033E-07 | 2.376E-04 |
|---|
| nuclear export | GO:0051168 | | 3.156E-06 | 3.63E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.596E-06 | 2.068E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.392E-06 | 2.48E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 2.506E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 2.257E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 2.169E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 7.924E-06 | 2.025E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 7.924E-06 | 1.823E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 9.492E-06 | 1.985E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 1.033E-07 | 2.376E-04 |
|---|
| nuclear export | GO:0051168 | | 3.156E-06 | 3.63E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.596E-06 | 2.068E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.392E-06 | 2.48E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 2.506E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 2.257E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 2.169E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 7.924E-06 | 2.025E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 7.924E-06 | 1.823E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 9.492E-06 | 1.985E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein export from nucleus | GO:0006611 | | 1.033E-07 | 2.376E-04 |
|---|
| nuclear export | GO:0051168 | | 3.156E-06 | 3.63E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.596E-06 | 2.068E-03 |
|---|
| DNA topological change | GO:0006265 | | 5.392E-06 | 2.48E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 2.506E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 2.257E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 2.169E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 7.924E-06 | 2.025E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 7.924E-06 | 1.823E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 9.492E-06 | 1.985E-03 |
|---|
