Study run-b1

Study informations

127 subnetworks in total page | file

236 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 28964-3-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.2173	2.897e-02	1.371e-02	1.333e-01
IPC-NIBC-129	0.2485	5.747e-02	4.691e-02	2.719e-01
Ivshina_GPL96-GPL97	0.1957	1.225e-02	7.723e-03	1.487e-01
Loi_GPL570	0.2620	1.466e-01	1.779e-01	4.916e-01
Loi_GPL96-GPL97	0.1493	1.524e-03	3.800e-04	1.054e-02
Pawitan_GPL96-GPL97	0.3715	7.505e-01	7.101e-01	9.968e-01
Schmidt	0.1811	2.178e-02	2.322e-02	1.444e-01
Sotiriou	0.2790	1.431e-01	6.974e-02	6.854e-01
Wang	0.2404	2.371e-02	1.341e-02	1.004e-01
Zhang	0.0501	3.207e-03	1.431e-03	1.822e-02

Expression data for subnetwork 28964-3-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Wang Zhang

Desmedt

Score for each gene in subnetwork 28964-3-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Wang	Zhang
ran		4	27	182	155	0.032	0.181	0.147	0.083	0.166	0.247	0.127	0.178	0.052	-0.025
ranbp9		4	27	182	155	0.172	0.207	0.012	0.253	0.126	0.148	0.143	0.127	0.205	0.021
xpot		1	90	200	200	0.102	0.232	0.134	0.107	0.143	0.175	0.096	0.186	0.150	0.124
ppfia1		1	90	200	200	0.164	0.080	0.149	0.269	0.151	0.225	0.036	0.176	0.153	0.127
git1		1	90	200	200	0.082	-0.027	0.097	0.051	0.077	0.138	0.087	0.097	-0.065	-0.065
wdr26		1	90	200	200	0.111	0.215	0.087	-0.083	0.118	0.301	0.112	0.100	0.197	-0.010

GO Enrichment output for subnetwork 28964-3-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.392E-06	0.01240104
microtubule cytoskeleton organization	GO:0000226		1.717E-05	0.01974993
mitotic spindle organization	GO:0007052		1.974E-05	0.01513083
neuron recognition	GO:0008038		3.763E-05	0.02163486
protein export from nucleus	GO:0006611		4.299E-05	0.01977366
regulation of ARF GTPase activity	GO:0032312		6.797E-05	0.02605444
spindle organization	GO:0007051		1.551E-04	0.05095416
regulation of ARF protein signal transduction	GO:0032012		1.767E-04	0.05080213
RNA export from nucleus	GO:0006405		1.88E-04	0.04805433
androgen receptor signaling pathway	GO:0030521		1.88E-04	0.0432489
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.634E-04	0.05506455

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.676E-06	0.01386615
mitotic spindle organization	GO:0007052		1.781E-05	0.02175495
neuron recognition	GO:0008038		3.234E-05	0.02633603
protein export from nucleus	GO:0006611		4.604E-05	0.02811972
spindle organization	GO:0007051		1.33E-04	0.06498106
regulation of ARF GTPase activity	GO:0032312		1.503E-04	0.06120824
androgen receptor signaling pathway	GO:0030521		1.783E-04	0.06222418
RNA export from nucleus	GO:0006405		2.192E-04	0.06695041
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.527E-04	0.06859032
regulation of ARF protein signal transduction	GO:0032012		3.266E-04	0.07978476
cell recognition	GO:0008037		3.953E-04	0.08778609

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		8.781E-06	0.02112633
mitotic spindle organization	GO:0007052		2.754E-05	0.03313244
neuron recognition	GO:0008038		5E-05	0.04009658
protein export from nucleus	GO:0006611		7.116E-05	0.04280204
spindle organization	GO:0007051		2.053E-04	0.09880777
regulation of ARF GTPase activity	GO:0032312		2.053E-04	0.08233981
androgen receptor signaling pathway	GO:0030521		2.604E-04	0.08950146
RNA export from nucleus	GO:0006405		2.752E-04	0.08275589
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		3.722E-04	0.09949984
regulation of ARF protein signal transduction	GO:0032012		4.64E-04	0.11164049
cell recognition	GO:0008037		5.872E-04	0.12844651

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.676E-06	0.01386615
mitotic spindle organization	GO:0007052		1.781E-05	0.02175495
neuron recognition	GO:0008038		3.234E-05	0.02633603
protein export from nucleus	GO:0006611		4.604E-05	0.02811972
spindle organization	GO:0007051		1.33E-04	0.06498106
regulation of ARF GTPase activity	GO:0032312		1.503E-04	0.06120824
androgen receptor signaling pathway	GO:0030521		1.783E-04	0.06222418
RNA export from nucleus	GO:0006405		2.192E-04	0.06695041
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.527E-04	0.06859032
regulation of ARF protein signal transduction	GO:0032012		3.266E-04	0.07978476
cell recognition	GO:0008037		3.953E-04	0.08778609

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		8.781E-06	0.02112633
mitotic spindle organization	GO:0007052		2.754E-05	0.03313244
neuron recognition	GO:0008038		5E-05	0.04009658
protein export from nucleus	GO:0006611		7.116E-05	0.04280204
spindle organization	GO:0007051		2.053E-04	0.09880777
regulation of ARF GTPase activity	GO:0032312		2.053E-04	0.08233981
androgen receptor signaling pathway	GO:0030521		2.604E-04	0.08950146
RNA export from nucleus	GO:0006405		2.752E-04	0.08275589
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		3.722E-04	0.09949984
regulation of ARF protein signal transduction	GO:0032012		4.64E-04	0.11164049
cell recognition	GO:0008037		5.872E-04	0.12844651

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		8.781E-06	0.02112633
mitotic spindle organization	GO:0007052		2.754E-05	0.03313244
neuron recognition	GO:0008038		5E-05	0.04009658
protein export from nucleus	GO:0006611		7.116E-05	0.04280204
spindle organization	GO:0007051		2.053E-04	0.09880777
regulation of ARF GTPase activity	GO:0032312		2.053E-04	0.08233981
androgen receptor signaling pathway	GO:0030521		2.604E-04	0.08950146
RNA export from nucleus	GO:0006405		2.752E-04	0.08275589
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		3.722E-04	0.09949984
regulation of ARF protein signal transduction	GO:0032012		4.64E-04	0.11164049
cell recognition	GO:0008037		5.872E-04	0.12844651

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.392E-06	0.01240104
microtubule cytoskeleton organization	GO:0000226		1.717E-05	0.01974993
mitotic spindle organization	GO:0007052		1.974E-05	0.01513083
neuron recognition	GO:0008038		3.763E-05	0.02163486
protein export from nucleus	GO:0006611		4.299E-05	0.01977366
regulation of ARF GTPase activity	GO:0032312		6.797E-05	0.02605444
spindle organization	GO:0007051		1.551E-04	0.05095416
regulation of ARF protein signal transduction	GO:0032012		1.767E-04	0.05080213
RNA export from nucleus	GO:0006405		1.88E-04	0.04805433
androgen receptor signaling pathway	GO:0030521		1.88E-04	0.0432489
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.634E-04	0.05506455

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.392E-06	0.01240104
microtubule cytoskeleton organization	GO:0000226		1.717E-05	0.01974993
mitotic spindle organization	GO:0007052		1.974E-05	0.01513083
neuron recognition	GO:0008038		3.763E-05	0.02163486
protein export from nucleus	GO:0006611		4.299E-05	0.01977366
regulation of ARF GTPase activity	GO:0032312		6.797E-05	0.02605444
spindle organization	GO:0007051		1.551E-04	0.05095416
regulation of ARF protein signal transduction	GO:0032012		1.767E-04	0.05080213
RNA export from nucleus	GO:0006405		1.88E-04	0.04805433
androgen receptor signaling pathway	GO:0030521		1.88E-04	0.0432489
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.634E-04	0.05506455

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.392E-06	0.01240104
microtubule cytoskeleton organization	GO:0000226		1.717E-05	0.01974993
mitotic spindle organization	GO:0007052		1.974E-05	0.01513083
neuron recognition	GO:0008038		3.763E-05	0.02163486
protein export from nucleus	GO:0006611		4.299E-05	0.01977366
regulation of ARF GTPase activity	GO:0032312		6.797E-05	0.02605444
spindle organization	GO:0007051		1.551E-04	0.05095416
regulation of ARF protein signal transduction	GO:0032012		1.767E-04	0.05080213
RNA export from nucleus	GO:0006405		1.88E-04	0.04805433
androgen receptor signaling pathway	GO:0030521		1.88E-04	0.0432489
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.634E-04	0.05506455

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
microtubule nucleation	GO:0007020		5.392E-06	0.01240104
microtubule cytoskeleton organization	GO:0000226		1.717E-05	0.01974993
mitotic spindle organization	GO:0007052		1.974E-05	0.01513083
neuron recognition	GO:0008038		3.763E-05	0.02163486
protein export from nucleus	GO:0006611		4.299E-05	0.01977366
regulation of ARF GTPase activity	GO:0032312		6.797E-05	0.02605444
spindle organization	GO:0007051		1.551E-04	0.05095416
regulation of ARF protein signal transduction	GO:0032012		1.767E-04	0.05080213
RNA export from nucleus	GO:0006405		1.88E-04	0.04805433
androgen receptor signaling pathway	GO:0030521		1.88E-04	0.0432489
regulation of G-protein coupled receptor protein signaling pathway	GO:0008277		2.634E-04	0.05506455