Study run-b1

Study informations

127 subnetworks in total page | file

236 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 23594-2-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1361	1.545e-02	5.850e-03	8.212e-02
IPC-NIBC-129	0.2473	1.271e-01	1.152e-01	5.157e-01
Ivshina_GPL96-GPL97	0.2260	1.254e-02	7.943e-03	1.518e-01
Loi_GPL570	0.1985	1.234e-01	1.520e-01	4.387e-01
Loi_GPL96-GPL97	0.2177	3.743e-02	2.814e-02	4.685e-01
Pawitan_GPL96-GPL97	0.3739	6.847e-02	3.349e-02	3.867e-01
Schmidt	0.1944	2.741e-02	2.907e-02	1.751e-01
Sotiriou	0.2645	4.769e-02	1.452e-02	3.508e-01
Wang	0.1815	6.566e-02	4.957e-02	2.214e-01
Zhang	0.2896	3.079e-03	1.367e-03	1.760e-02

Expression data for subnetwork 23594-2-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Wang Zhang

Desmedt

Score for each gene in subnetwork 23594-2-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Wang	Zhang
cdkn3		18	9	26	16	0.114	0.269	0.199	0.136	0.193	0.323	0.186	0.198	0.134	0.271
mcm6		2	53	97	94	0.021	0.271	0.148	0.061	0.121	0.320	0.258	0.144	0.141	0.084
orc6l		2	53	97	94	0.094	0.270	0.084	0.114	0.106	0.234	0.192	0.105	0.086	0.175
cdc2		99	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.067	0.297
ccnb1		33	4	68	40	0.082	0.246	0.212	0.224	0.256	0.351	0.129	0.249	0.152	0.167
ccnd1		97	2	8	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.106	0.144

GO Enrichment output for subnetwork 23594-2-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.749E-08	1.552E-04
interphase	GO:0051325		7.408E-08	8.519E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.152E-06	8.835E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.941E-06	1.116E-03
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		3.345E-06	1.539E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		3.514E-06	1.347E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		4.056E-06	1.333E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		4.056E-06	1.166E-03
positive regulation of ligase activity	GO:0051351		4.86E-06	1.242E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.941E-06	1.136E-03
regulation of ubiquitin-protein ligase activity	GO:0051438		5.299E-06	1.108E-03

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.766E-08	4.315E-05
G1/S transition of mitotic cell cycle	GO:0000082		3.323E-07	4.059E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		6.393E-07	5.206E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		1.093E-06	6.675E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		1.142E-06	5.582E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.3E-06	5.292E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.3E-06	4.536E-04
positive regulation of ligase activity	GO:0051351		1.593E-06	4.864E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		1.721E-06	4.672E-04
regulation of ligase activity	GO:0051340		2.072E-06	5.063E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.436E-06	5.409E-04

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.923E-08	4.626E-05
interphase	GO:0051325		2.18E-08	2.623E-05
G1/S transition of mitotic cell cycle	GO:0000082		3.972E-07	3.185E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		7.641E-07	4.596E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		1.306E-06	6.285E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		1.365E-06	5.475E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.553E-06	5.339E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.553E-06	4.672E-04
positive regulation of ligase activity	GO:0051351		1.903E-06	5.089E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		2.057E-06	4.949E-04
regulation of ligase activity	GO:0051340		2.476E-06	5.417E-04

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.766E-08	4.315E-05
G1/S transition of mitotic cell cycle	GO:0000082		3.323E-07	4.059E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		6.393E-07	5.206E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		1.093E-06	6.675E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		1.142E-06	5.582E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.3E-06	5.292E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.3E-06	4.536E-04
positive regulation of ligase activity	GO:0051351		1.593E-06	4.864E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		1.721E-06	4.672E-04
regulation of ligase activity	GO:0051340		2.072E-06	5.063E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.436E-06	5.409E-04

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.923E-08	4.626E-05
interphase	GO:0051325		2.18E-08	2.623E-05
G1/S transition of mitotic cell cycle	GO:0000082		3.972E-07	3.185E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		7.641E-07	4.596E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		1.306E-06	6.285E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		1.365E-06	5.475E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.553E-06	5.339E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.553E-06	4.672E-04
positive regulation of ligase activity	GO:0051351		1.903E-06	5.089E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		2.057E-06	4.949E-04
regulation of ligase activity	GO:0051340		2.476E-06	5.417E-04

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.923E-08	4.626E-05
interphase	GO:0051325		2.18E-08	2.623E-05
G1/S transition of mitotic cell cycle	GO:0000082		3.972E-07	3.185E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		7.641E-07	4.596E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		1.306E-06	6.285E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		1.365E-06	5.475E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.553E-06	5.339E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.553E-06	4.672E-04
positive regulation of ligase activity	GO:0051351		1.903E-06	5.089E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		2.057E-06	4.949E-04
regulation of ligase activity	GO:0051340		2.476E-06	5.417E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.749E-08	1.552E-04
interphase	GO:0051325		7.408E-08	8.519E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.152E-06	8.835E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.941E-06	1.116E-03
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		3.345E-06	1.539E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		3.514E-06	1.347E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		4.056E-06	1.333E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		4.056E-06	1.166E-03
positive regulation of ligase activity	GO:0051351		4.86E-06	1.242E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.941E-06	1.136E-03
regulation of ubiquitin-protein ligase activity	GO:0051438		5.299E-06	1.108E-03

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.749E-08	1.552E-04
interphase	GO:0051325		7.408E-08	8.519E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.152E-06	8.835E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.941E-06	1.116E-03
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		3.345E-06	1.539E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		3.514E-06	1.347E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		4.056E-06	1.333E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		4.056E-06	1.166E-03
positive regulation of ligase activity	GO:0051351		4.86E-06	1.242E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.941E-06	1.136E-03
regulation of ubiquitin-protein ligase activity	GO:0051438		5.299E-06	1.108E-03

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.749E-08	1.552E-04
interphase	GO:0051325		7.408E-08	8.519E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.152E-06	8.835E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.941E-06	1.116E-03
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		3.345E-06	1.539E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		3.514E-06	1.347E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		4.056E-06	1.333E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		4.056E-06	1.166E-03
positive regulation of ligase activity	GO:0051351		4.86E-06	1.242E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.941E-06	1.136E-03
regulation of ubiquitin-protein ligase activity	GO:0051438		5.299E-06	1.108E-03

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.749E-08	1.552E-04
interphase	GO:0051325		7.408E-08	8.519E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.152E-06	8.835E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.941E-06	1.116E-03
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		3.345E-06	1.539E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		3.514E-06	1.347E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		4.056E-06	1.333E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		4.056E-06	1.166E-03
positive regulation of ligase activity	GO:0051351		4.86E-06	1.242E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.941E-06	1.136E-03
regulation of ubiquitin-protein ligase activity	GO:0051438		5.299E-06	1.108E-03