Study run-b1

Study informations

127 subnetworks in total page | file

236 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 11338-0-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1728	1.064e-02	3.519e-03	6.120e-02
IPC-NIBC-129	0.2231	1.437e-01	1.322e-01	5.607e-01
Ivshina_GPL96-GPL97	0.2438	2.033e-02	1.400e-02	2.271e-01
Loi_GPL570	0.1885	7.012e-02	9.048e-02	2.924e-01
Loi_GPL96-GPL97	0.1906	9.190e-03	4.388e-03	1.207e-01
Pawitan_GPL96-GPL97	0.3023	6.814e-02	3.328e-02	3.854e-01
Schmidt	0.2373	2.089e-02	2.229e-02	1.393e-01
Sotiriou	0.2816	7.402e-02	2.724e-02	4.736e-01
Wang	0.1632	8.971e-02	7.348e-02	2.788e-01
Zhang	0.2900	1.035e-02	5.293e-03	4.808e-02

Expression data for subnetwork 11338-0-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Wang Zhang

Desmedt

Score for each gene in subnetwork 11338-0-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Wang	Zhang
hnrnpa1		2	53	70	60	-0.021	0.209	0.088	-0.020	0.087	0.082	0.036	0.089	0.077	0.083
cdc2		99	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.067	0.297
srpk1		3	39	122	104	0.013	0.261	0.105	0.234	0.112	0.144	0.241	0.115	0.116	0.050
top2a		22	7	70	46	0.147	0.183	0.185	0.100	0.206	0.309	0.261	0.183	0.072	0.234
u2af2		1	90	122	128	0.173	-0.048	0.176	0.034	0.111	-0.047	0.090	0.123	0.156	0.103
ccnd1		97	2	8	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.106	0.144

GO Enrichment output for subnetwork 11338-0-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		4.314E-06	9.923E-03
regulation of retroviral genome replication	GO:0045091		4.314E-06	4.962E-03
DNA topological change	GO:0006265		6.469E-06	4.96E-03
chromosome segregation	GO:0007059		7.081E-06	4.071E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		9.053E-06	4.165E-03
DNA ligation	GO:0006266		1.551E-05	5.945E-03
positive regulation of viral reproduction	GO:0048524		1.938E-05	6.367E-03
regulation of mRNA processing	GO:0050684		2.367E-05	6.807E-03
cellular response to unfolded protein	GO:0034620		5.156E-05	0.0131754
regulation of viral genome replication	GO:0045069		5.841E-05	0.01343378
apoptotic nuclear changes	GO:0030262		7.338E-05	0.01534375

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		1.661E-06	4.058E-03
regulation of retroviral genome replication	GO:0045091		2.491E-06	3.043E-03
chromosome segregation	GO:0007059		2.866E-06	2.334E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.648E-06	2.838E-03
DNA topological change	GO:0006265		4.648E-06	2.271E-03
DNA ligation	GO:0006266		7.466E-06	3.04E-03
positive regulation of viral reproduction	GO:0048524		7.466E-06	2.605E-03
regulation of mRNA processing	GO:0050684		1.74E-05	5.313E-03
regulation of viral genome replication	GO:0045069		2.533E-05	6.877E-03
cellular response to unfolded protein	GO:0034620		3.144E-05	7.682E-03
apoptotic nuclear changes	GO:0030262		3.821E-05	8.486E-03

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		2.313E-06	5.566E-03
regulation of retroviral genome replication	GO:0045091		2.313E-06	2.783E-03
chromosome segregation	GO:0007059		4.697E-06	3.767E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.472E-06	3.893E-03
DNA topological change	GO:0006265		6.472E-06	3.114E-03
DNA ligation	GO:0006266		1.039E-05	4.168E-03
positive regulation of viral reproduction	GO:0048524		1.039E-05	3.573E-03
regulation of mRNA processing	GO:0050684		2.1E-05	6.315E-03
regulation of viral genome replication	GO:0045069		3.135E-05	8.382E-03
cellular response to unfolded protein	GO:0034620		3.94E-05	9.479E-03
apoptotic nuclear changes	GO:0030262		5.318E-05	0.01163122

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		1.661E-06	4.058E-03
regulation of retroviral genome replication	GO:0045091		2.491E-06	3.043E-03
chromosome segregation	GO:0007059		2.866E-06	2.334E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		4.648E-06	2.838E-03
DNA topological change	GO:0006265		4.648E-06	2.271E-03
DNA ligation	GO:0006266		7.466E-06	3.04E-03
positive regulation of viral reproduction	GO:0048524		7.466E-06	2.605E-03
regulation of mRNA processing	GO:0050684		1.74E-05	5.313E-03
regulation of viral genome replication	GO:0045069		2.533E-05	6.877E-03
cellular response to unfolded protein	GO:0034620		3.144E-05	7.682E-03
apoptotic nuclear changes	GO:0030262		3.821E-05	8.486E-03

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		2.313E-06	5.566E-03
regulation of retroviral genome replication	GO:0045091		2.313E-06	2.783E-03
chromosome segregation	GO:0007059		4.697E-06	3.767E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.472E-06	3.893E-03
DNA topological change	GO:0006265		6.472E-06	3.114E-03
DNA ligation	GO:0006266		1.039E-05	4.168E-03
positive regulation of viral reproduction	GO:0048524		1.039E-05	3.573E-03
regulation of mRNA processing	GO:0050684		2.1E-05	6.315E-03
regulation of viral genome replication	GO:0045069		3.135E-05	8.382E-03
cellular response to unfolded protein	GO:0034620		3.94E-05	9.479E-03
apoptotic nuclear changes	GO:0030262		5.318E-05	0.01163122

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		2.313E-06	5.566E-03
regulation of retroviral genome replication	GO:0045091		2.313E-06	2.783E-03
chromosome segregation	GO:0007059		4.697E-06	3.767E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.472E-06	3.893E-03
DNA topological change	GO:0006265		6.472E-06	3.114E-03
DNA ligation	GO:0006266		1.039E-05	4.168E-03
positive regulation of viral reproduction	GO:0048524		1.039E-05	3.573E-03
regulation of mRNA processing	GO:0050684		2.1E-05	6.315E-03
regulation of viral genome replication	GO:0045069		3.135E-05	8.382E-03
cellular response to unfolded protein	GO:0034620		3.94E-05	9.479E-03
apoptotic nuclear changes	GO:0030262		5.318E-05	0.01163122

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		4.314E-06	9.923E-03
regulation of retroviral genome replication	GO:0045091		4.314E-06	4.962E-03
DNA topological change	GO:0006265		6.469E-06	4.96E-03
chromosome segregation	GO:0007059		7.081E-06	4.071E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		9.053E-06	4.165E-03
DNA ligation	GO:0006266		1.551E-05	5.945E-03
positive regulation of viral reproduction	GO:0048524		1.938E-05	6.367E-03
regulation of mRNA processing	GO:0050684		2.367E-05	6.807E-03
cellular response to unfolded protein	GO:0034620		5.156E-05	0.0131754
regulation of viral genome replication	GO:0045069		5.841E-05	0.01343378
apoptotic nuclear changes	GO:0030262		7.338E-05	0.01534375

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		4.314E-06	9.923E-03
regulation of retroviral genome replication	GO:0045091		4.314E-06	4.962E-03
DNA topological change	GO:0006265		6.469E-06	4.96E-03
chromosome segregation	GO:0007059		7.081E-06	4.071E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		9.053E-06	4.165E-03
DNA ligation	GO:0006266		1.551E-05	5.945E-03
positive regulation of viral reproduction	GO:0048524		1.938E-05	6.367E-03
regulation of mRNA processing	GO:0050684		2.367E-05	6.807E-03
cellular response to unfolded protein	GO:0034620		5.156E-05	0.0131754
regulation of viral genome replication	GO:0045069		5.841E-05	0.01343378
apoptotic nuclear changes	GO:0030262		7.338E-05	0.01534375

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		4.314E-06	9.923E-03
regulation of retroviral genome replication	GO:0045091		4.314E-06	4.962E-03
DNA topological change	GO:0006265		6.469E-06	4.96E-03
chromosome segregation	GO:0007059		7.081E-06	4.071E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		9.053E-06	4.165E-03
DNA ligation	GO:0006266		1.551E-05	5.945E-03
positive regulation of viral reproduction	GO:0048524		1.938E-05	6.367E-03
regulation of mRNA processing	GO:0050684		2.367E-05	6.807E-03
cellular response to unfolded protein	GO:0034620		5.156E-05	0.0131754
regulation of viral genome replication	GO:0045069		5.841E-05	0.01343378
apoptotic nuclear changes	GO:0030262		7.338E-05	0.01534375

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of viral genome replication	GO:0045070		4.314E-06	9.923E-03
regulation of retroviral genome replication	GO:0045091		4.314E-06	4.962E-03
DNA topological change	GO:0006265		6.469E-06	4.96E-03
chromosome segregation	GO:0007059		7.081E-06	4.071E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		9.053E-06	4.165E-03
DNA ligation	GO:0006266		1.551E-05	5.945E-03
positive regulation of viral reproduction	GO:0048524		1.938E-05	6.367E-03
regulation of mRNA processing	GO:0050684		2.367E-05	6.807E-03
cellular response to unfolded protein	GO:0034620		5.156E-05	0.0131754
regulation of viral genome replication	GO:0045069		5.841E-05	0.01343378
apoptotic nuclear changes	GO:0030262		7.338E-05	0.01534375