Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 1104-0-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1364 | 1.500e-02 | 5.619e-03 | 8.024e-02 |
|---|
| IPC-NIBC-129 | 0.1991 | 6.053e-02 | 4.976e-02 | 2.848e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2274 | 3.266e-02 | 2.438e-02 | 3.261e-01 |
|---|
| Loi_GPL570 | 0.2579 | 2.160e-01 | 2.535e-01 | 6.219e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2265 | 3.705e-02 | 2.777e-02 | 4.649e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3436 | 1.679e-01 | 1.058e-01 | 6.639e-01 |
|---|
| Schmidt | 0.1507 | 1.916e-02 | 2.048e-02 | 1.293e-01 |
|---|
| Sotiriou | 0.2871 | 4.124e-02 | 1.179e-02 | 3.152e-01 |
|---|
| Wang | 0.1814 | 6.580e-02 | 4.971e-02 | 2.218e-01 |
|---|
| Zhang | 0.2064 | 5.150e-03 | 2.427e-03 | 2.706e-02 |
|---|
Expression data for subnetwork 1104-0-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 1104-0-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| ran |   | 4 | 27 | 182 | 155 | 0.032 | 0.181 | 0.147 | 0.083 | 0.166 | 0.247 | 0.127 | 0.178 | 0.052 | -0.025 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| ranbp9 | | 4 | 27 | 182 | 155 | 0.172 | 0.207 | 0.012 | 0.253 | 0.126 | 0.148 | 0.143 | 0.127 | 0.205 | 0.021 |
|---|
| rcc1 | | 3 | 39 | 182 | 166 | -0.056 | 0.114 | 0.136 | 0.093 | 0.114 | 0.167 | 0.113 | 0.063 | -0.108 | 0.072 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 1104-0-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 |  | 5.282E-08 | 1.215E-04 |
|---|
| microtubule cytoskeleton organization | GO:0000226 | | 3.431E-07 | 3.946E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.773E-07 | 2.893E-04 |
|---|
| interphase | GO:0051325 | | 4.14E-07 | 2.38E-04 |
|---|
| spindle organization | GO:0007051 | | 1.289E-06 | 5.93E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.897E-06 | 1.494E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.128E-05 | 2.882E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.185E-05 | 2.724E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.366E-05 | 2.857E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 2.392E-08 | 5.844E-05 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.614E-07 | 1.971E-04 |
|---|
| spindle organization | GO:0007051 | | 5.359E-07 | 4.364E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.633E-06 | 9.972E-04 |
|---|
| microtubule nucleation | GO:0007020 | | 5.079E-06 | 2.482E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 5.353E-06 | 2.18E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.595E-06 | 1.953E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 6.363E-06 | 1.943E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 6.363E-06 | 1.727E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.77E-06 | 1.654E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 7.791E-06 | 1.73E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 3.93E-08 | 9.456E-05 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.748E-07 | 3.306E-04 |
|---|
| interphase | GO:0051325 | | 3.114E-07 | 2.498E-04 |
|---|
| spindle organization | GO:0007051 | | 8.795E-07 | 5.29E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 2.678E-06 | 1.288E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.072E-06 | 2.836E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.768E-06 | 3.014E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 9.163E-06 | 2.756E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.426E-06 | 2.52E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.042E-05 | 2.507E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.042E-05 | 2.279E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 2.392E-08 | 5.844E-05 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.614E-07 | 1.971E-04 |
|---|
| spindle organization | GO:0007051 | | 5.359E-07 | 4.364E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.633E-06 | 9.972E-04 |
|---|
| microtubule nucleation | GO:0007020 | | 5.079E-06 | 2.482E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 5.353E-06 | 2.18E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.595E-06 | 1.953E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 6.363E-06 | 1.943E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 6.363E-06 | 1.727E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.77E-06 | 1.654E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 7.791E-06 | 1.73E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 3.93E-08 | 9.456E-05 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.748E-07 | 3.306E-04 |
|---|
| interphase | GO:0051325 | | 3.114E-07 | 2.498E-04 |
|---|
| spindle organization | GO:0007051 | | 8.795E-07 | 5.29E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 2.678E-06 | 1.288E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.072E-06 | 2.836E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.768E-06 | 3.014E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 9.163E-06 | 2.756E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.426E-06 | 2.52E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.042E-05 | 2.507E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.042E-05 | 2.279E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 3.93E-08 | 9.456E-05 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.748E-07 | 3.306E-04 |
|---|
| interphase | GO:0051325 | | 3.114E-07 | 2.498E-04 |
|---|
| spindle organization | GO:0007051 | | 8.795E-07 | 5.29E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 2.678E-06 | 1.288E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.072E-06 | 2.836E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 8.768E-06 | 3.014E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 9.163E-06 | 2.756E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.426E-06 | 2.52E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.042E-05 | 2.507E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.042E-05 | 2.279E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 5.282E-08 | 1.215E-04 |
|---|
| microtubule cytoskeleton organization | GO:0000226 | | 3.431E-07 | 3.946E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.773E-07 | 2.893E-04 |
|---|
| interphase | GO:0051325 | | 4.14E-07 | 2.38E-04 |
|---|
| spindle organization | GO:0007051 | | 1.289E-06 | 5.93E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.897E-06 | 1.494E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.128E-05 | 2.882E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.185E-05 | 2.724E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.366E-05 | 2.857E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 5.282E-08 | 1.215E-04 |
|---|
| microtubule cytoskeleton organization | GO:0000226 | | 3.431E-07 | 3.946E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.773E-07 | 2.893E-04 |
|---|
| interphase | GO:0051325 | | 4.14E-07 | 2.38E-04 |
|---|
| spindle organization | GO:0007051 | | 1.289E-06 | 5.93E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.897E-06 | 1.494E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.128E-05 | 2.882E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.185E-05 | 2.724E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.366E-05 | 2.857E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 5.282E-08 | 1.215E-04 |
|---|
| microtubule cytoskeleton organization | GO:0000226 | | 3.431E-07 | 3.946E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.773E-07 | 2.893E-04 |
|---|
| interphase | GO:0051325 | | 4.14E-07 | 2.38E-04 |
|---|
| spindle organization | GO:0007051 | | 1.289E-06 | 5.93E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.897E-06 | 1.494E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.128E-05 | 2.882E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.185E-05 | 2.724E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.366E-05 | 2.857E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| mitotic spindle organization | GO:0007052 | | 5.282E-08 | 1.215E-04 |
|---|
| microtubule cytoskeleton organization | GO:0000226 | | 3.431E-07 | 3.946E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.773E-07 | 2.893E-04 |
|---|
| interphase | GO:0051325 | | 4.14E-07 | 2.38E-04 |
|---|
| spindle organization | GO:0007051 | | 1.289E-06 | 5.93E-04 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.897E-06 | 1.494E-03 |
|---|
| microtubule nucleation | GO:0007020 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.128E-05 | 2.882E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.185E-05 | 2.724E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.366E-05 | 2.857E-03 |
|---|
