Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 10615-0-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1539 | 9.544e-03 | 3.032e-03 | 5.611e-02 |
|---|
| IPC-NIBC-129 | 0.2431 | 1.775e-01 | 1.674e-01 | 6.407e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2490 | 1.365e-02 | 8.775e-03 | 1.633e-01 |
|---|
| Loi_GPL570 | 0.1712 | 9.534e-02 | 1.200e-01 | 3.666e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2520 | 1.919e-02 | 1.171e-02 | 2.646e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3026 | 2.290e-01 | 1.573e-01 | 7.657e-01 |
|---|
| Schmidt | 0.2141 | 3.672e-02 | 3.869e-02 | 2.220e-01 |
|---|
| Sotiriou | 0.2459 | 2.707e-02 | 6.453e-03 | 2.266e-01 |
|---|
| Wang | 0.1188 | 1.886e-01 | 1.836e-01 | 4.666e-01 |
|---|
| Zhang | 0.1766 | 1.031e-02 | 5.267e-03 | 4.791e-02 |
|---|
Expression data for subnetwork 10615-0-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 10615-0-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| cdc2 |   | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| pttg1 | | 4 | 27 | 173 | 150 | 0.072 | 0.270 | 0.175 | 0.183 | 0.200 | 0.334 | 0.224 | 0.204 | 0.147 | 0.210 |
|---|
| krt18 | | 13 | 12 | 99 | 67 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | 0.086 | -0.114 |
|---|
| spag5 | | 1 | 90 | 225 | 230 | 0.127 | 0.245 | 0.169 | 0.063 | 0.186 | 0.087 | 0.212 | 0.133 | 0.062 | 0.144 |
|---|
GO Enrichment output for subnetwork 10615-0-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 |  | 1.498E-05 | 0.0344606 |
|---|
| spindle organization | GO:0007051 | | 4.252E-05 | 0.04889845 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.812E-05 | 0.04455537 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.394E-04 | 0.08013528 |
|---|
| chromosome segregation | GO:0007059 | | 1.554E-04 | 0.0714674 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.78E-04 | 0.06824637 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.839E-04 | 0.06043755 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.022E-04 | 0.05814169 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.022E-04 | 0.0516815 |
|---|
| regulation of Ras GTPase activity | GO:0032318 | | 2.214E-04 | 0.05091772 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.28E-04 | 0.04766331 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.985E-07 | 1.218E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 4.985E-07 | 6.089E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 6.543E-06 | 5.328E-03 |
|---|
| spindle organization | GO:0007051 | | 1.175E-05 | 7.177E-03 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 4.326E-05 | 0.02113889 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 4.326E-05 | 0.01761574 |
|---|
| chromosome segregation | GO:0007059 | | 5.225E-05 | 0.0182346 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 5.383E-05 | 0.01643753 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.543E-05 | 0.01504616 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 6.038E-05 | 0.01475038 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 6.038E-05 | 0.01340944 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 6.943E-07 | 1.67E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 6.943E-07 | 8.352E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.111E-06 | 7.307E-03 |
|---|
| spindle organization | GO:0007051 | | 1.636E-05 | 9.842E-03 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.631E-05 | 0.02709536 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 5.631E-05 | 0.02257947 |
|---|
| chromosome segregation | GO:0007059 | | 7.271E-05 | 0.02499181 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.491E-05 | 0.0225285 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 7.714E-05 | 0.02062127 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 8.402E-05 | 0.02021508 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 8.402E-05 | 0.01837734 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.985E-07 | 1.218E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 4.985E-07 | 6.089E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 6.543E-06 | 5.328E-03 |
|---|
| spindle organization | GO:0007051 | | 1.175E-05 | 7.177E-03 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 4.326E-05 | 0.02113889 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 4.326E-05 | 0.01761574 |
|---|
| chromosome segregation | GO:0007059 | | 5.225E-05 | 0.0182346 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 5.383E-05 | 0.01643753 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.543E-05 | 0.01504616 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 6.038E-05 | 0.01475038 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 6.038E-05 | 0.01340944 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 6.943E-07 | 1.67E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 6.943E-07 | 8.352E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.111E-06 | 7.307E-03 |
|---|
| spindle organization | GO:0007051 | | 1.636E-05 | 9.842E-03 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.631E-05 | 0.02709536 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 5.631E-05 | 0.02257947 |
|---|
| chromosome segregation | GO:0007059 | | 7.271E-05 | 0.02499181 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.491E-05 | 0.0225285 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 7.714E-05 | 0.02062127 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 8.402E-05 | 0.02021508 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 8.402E-05 | 0.01837734 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 6.943E-07 | 1.67E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 6.943E-07 | 8.352E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.111E-06 | 7.307E-03 |
|---|
| spindle organization | GO:0007051 | | 1.636E-05 | 9.842E-03 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.631E-05 | 0.02709536 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 5.631E-05 | 0.02257947 |
|---|
| chromosome segregation | GO:0007059 | | 7.271E-05 | 0.02499181 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.491E-05 | 0.0225285 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 7.714E-05 | 0.02062127 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 8.402E-05 | 0.02021508 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 8.402E-05 | 0.01837734 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.498E-05 | 0.0344606 |
|---|
| spindle organization | GO:0007051 | | 4.252E-05 | 0.04889845 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.812E-05 | 0.04455537 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.394E-04 | 0.08013528 |
|---|
| chromosome segregation | GO:0007059 | | 1.554E-04 | 0.0714674 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.78E-04 | 0.06824637 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.839E-04 | 0.06043755 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.022E-04 | 0.05814169 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.022E-04 | 0.0516815 |
|---|
| regulation of Ras GTPase activity | GO:0032318 | | 2.214E-04 | 0.05091772 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.28E-04 | 0.04766331 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.498E-05 | 0.0344606 |
|---|
| spindle organization | GO:0007051 | | 4.252E-05 | 0.04889845 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.812E-05 | 0.04455537 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.394E-04 | 0.08013528 |
|---|
| chromosome segregation | GO:0007059 | | 1.554E-04 | 0.0714674 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.78E-04 | 0.06824637 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.839E-04 | 0.06043755 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.022E-04 | 0.05814169 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.022E-04 | 0.0516815 |
|---|
| regulation of Ras GTPase activity | GO:0032318 | | 2.214E-04 | 0.05091772 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.28E-04 | 0.04766331 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.498E-05 | 0.0344606 |
|---|
| spindle organization | GO:0007051 | | 4.252E-05 | 0.04889845 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.812E-05 | 0.04455537 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.394E-04 | 0.08013528 |
|---|
| chromosome segregation | GO:0007059 | | 1.554E-04 | 0.0714674 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.78E-04 | 0.06824637 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.839E-04 | 0.06043755 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.022E-04 | 0.05814169 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.022E-04 | 0.0516815 |
|---|
| regulation of Ras GTPase activity | GO:0032318 | | 2.214E-04 | 0.05091772 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.28E-04 | 0.04766331 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.498E-05 | 0.0344606 |
|---|
| spindle organization | GO:0007051 | | 4.252E-05 | 0.04889845 |
|---|
| regulation of Rab protein signal transduction | GO:0032483 | | 5.812E-05 | 0.04455537 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.394E-04 | 0.08013528 |
|---|
| chromosome segregation | GO:0007059 | | 1.554E-04 | 0.0714674 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.78E-04 | 0.06824637 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.839E-04 | 0.06043755 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.022E-04 | 0.05814169 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.022E-04 | 0.0516815 |
|---|
| regulation of Ras GTPase activity | GO:0032318 | | 2.214E-04 | 0.05091772 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.28E-04 | 0.04766331 |
|---|
