Study run-a2
Study informations
103 subnetworks in total page | file
306 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 5704-7-real
score
Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
Desmedt | 0.1631 | 1.391e-02 | 1.089e-02 | 1.131e-01 |
IPC-NIBC-129 | 0.2387 | 5.719e-02 | 8.180e-02 | 4.833e-01 |
Ivshina_GPL96-GPL97 | 0.2338 | 1.577e-02 | 2.521e-02 | 3.471e-01 |
Loi_GPL570 | 0.1932 | 1.288e-01 | 1.426e-01 | 4.399e-01 |
Loi_GPL96-GPL97 | 0.1637 | 6.000e-06 | 6.000e-05 | 3.000e-05 |
Parker_GPL1390 | 0.2187 | 6.150e-02 | 7.565e-02 | 4.402e-01 |
Parker_GPL887 | 0.1499 | 4.493e-01 | 4.684e-01 | 5.020e-01 |
Pawitan_GPL96-GPL97 | 0.3615 | 3.410e-01 | 2.692e-01 | 8.977e-01 |
Schmidt | 0.2285 | 1.597e-02 | 1.819e-02 | 2.004e-01 |
Sotiriou | 0.2853 | 1.894e-02 | 1.477e-02 | 2.687e-01 |
Van-De-Vijver | 0.2471 | 1.017e-03 | 1.464e-03 | 5.937e-02 |
Zhang | 0.2844 | 1.271e-01 | 8.217e-02 | 2.683e-01 |
Zhou | 0.4194 | 6.557e-02 | 5.389e-02 | 3.876e-01 |
Expression data for subnetwork 5704-7-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Van-De-Vijver |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt

Score for each gene in subnetwork 5704-7-real in each dataset
Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Van-De-Vijver | Zhang | Zhou |
cdkn3 |  | 53 | 5 | 29 | 22 | 0.114 | 0.269 | 0.199 | 0.136 | 0.193 | 0.166 | -0.009 | 0.323 | 0.186 | 0.198 | 0.201 | 0.271 | 0.372 |
cdkn1a |  | 44 | 7 | 1 | 4 | 0.115 | -0.020 | 0.065 | 0.082 | 0.099 | 0.124 | 0.055 | 0.087 | 0.068 | 0.144 | undef | -0.201 | 0.069 |
psmd10 |  | 1 | 116 | 246 | 248 | -0.028 | 0.099 | 0.108 | 0.130 | 0.137 | 0.119 | 0.148 | 0.153 | 0.061 | 0.191 | 0.023 | 0.135 | 0.184 |
tle1 |  | 47 | 6 | 1 | 3 | 0.062 | 0.235 | -0.032 | -0.177 | 0.033 | 0.085 | 0.339 | 0.068 | 0.126 | -0.027 | 0.170 | 0.068 | 0.025 |
ube2c |  | 1 | 116 | 246 | 248 | 0.145 | 0.176 | 0.178 | 0.223 | 0.211 | -0.056 | 0.261 | 0.313 | 0.250 | 0.214 | undef | 0.147 | 0.316 |
ccnd1 |  | 92 | 2 | 18 | 12 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | undef | 0.144 | 0.290 |
cks2 |  | 12 | 18 | 34 | 32 | 0.050 | 0.233 | 0.170 | 0.103 | 0.186 | 0.172 | 0.093 | 0.167 | 0.263 | 0.151 | 0.080 | 0.284 | 0.383 |
cdc2 |  | 96 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.162 | 0.297 | 0.336 |
psmc4 |  | 1 | 116 | 246 | 248 | -0.035 | 0.118 | 0.114 | 0.004 | 0.094 | 0.132 | 0.080 | 0.279 | -0.032 | 0.034 | 0.163 | -0.040 | 0.231 |
cdc25a |  | 8 | 26 | 95 | 79 | -0.019 | 0.221 | 0.093 | 0.158 | 0.120 | -0.061 | 0.406 | 0.207 | 0.211 | 0.016 | -0.019 | 0.183 | 0.264 |
anapc2 |  | 2 | 78 | 34 | 42 | 0.054 | -0.106 | 0.034 | -0.056 | 0.063 | -0.039 | 0.426 | 0.009 | -0.039 | -0.011 | 0.129 | 0.074 | 0.213 |
sfn |  | 61 | 3 | 1 | 2 | 0.077 | 0.137 | 0.111 | 0.172 | 0.112 | 0.119 | 0.141 | 0.219 | 0.100 | 0.147 | 0.158 | 0.079 | 0.181 |
GO Enrichment output for subnetwork 5704-7-real in each dataset
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 2.175E-16 | 5.002E-13 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.672E-11 | 4.223E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.063E-11 | 3.115E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.448E-11 | 3.133E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.448E-11 | 2.506E-08 |
positive regulation of ligase activity | GO:0051351 |  | 7.887E-11 | 3.023E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.411E-11 | 3.092E-08 |
regulation of ligase activity | GO:0051340 |  | 1.32E-10 | 3.794E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 1.963E-10 | 5.017E-08 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 4.501E-09 | 1.035E-06 |
negative regulation of ligase activity | GO:0051352 |  | 4.9E-09 | 1.025E-06 |
IPC-NIBC-129 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.26E-17 | 3.078E-14 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.848E-12 | 4.7E-09 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.212E-12 | 3.43E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.483E-12 | 3.349E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.483E-12 | 2.679E-09 |
positive regulation of ligase activity | GO:0051351 |  | 8.304E-12 | 3.381E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.727E-12 | 3.395E-09 |
regulation of ligase activity | GO:0051340 |  | 1.42E-11 | 4.335E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.652E-11 | 7.199E-09 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 6.698E-10 | 1.636E-07 |
negative regulation of ligase activity | GO:0051352 |  | 7.227E-10 | 1.605E-07 |
Ivshina_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.22E-17 | 2.935E-14 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.995E-12 | 4.806E-09 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.374E-12 | 3.508E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.694E-12 | 3.425E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.694E-12 | 2.74E-09 |
positive regulation of ligase activity | GO:0051351 |  | 8.623E-12 | 3.458E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.01E-11 | 3.472E-09 |
regulation of ligase activity | GO:0051340 |  | 1.474E-11 | 4.434E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.755E-11 | 7.364E-09 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 7.07E-10 | 1.701E-07 |
negative regulation of ligase activity | GO:0051352 |  | 7.628E-10 | 1.668E-07 |
Loi_GPL570 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.26E-17 | 3.078E-14 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.848E-12 | 4.7E-09 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.212E-12 | 3.43E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.483E-12 | 3.349E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.483E-12 | 2.679E-09 |
positive regulation of ligase activity | GO:0051351 |  | 8.304E-12 | 3.381E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.727E-12 | 3.395E-09 |
regulation of ligase activity | GO:0051340 |  | 1.42E-11 | 4.335E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.652E-11 | 7.199E-09 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 6.698E-10 | 1.636E-07 |
negative regulation of ligase activity | GO:0051352 |  | 7.227E-10 | 1.605E-07 |
Loi_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.22E-17 | 2.935E-14 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.995E-12 | 4.806E-09 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.374E-12 | 3.508E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.694E-12 | 3.425E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.694E-12 | 2.74E-09 |
positive regulation of ligase activity | GO:0051351 |  | 8.623E-12 | 3.458E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.01E-11 | 3.472E-09 |
regulation of ligase activity | GO:0051340 |  | 1.474E-11 | 4.434E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.755E-11 | 7.364E-09 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 7.07E-10 | 1.701E-07 |
negative regulation of ligase activity | GO:0051352 |  | 7.628E-10 | 1.668E-07 |
Parker_GPL1390 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.599E-18 | 5.71E-15 |
cyclin-dependent protein kinase regulator activity | GO:0016538 |  | 5.533E-11 | 9.88E-08 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 4.663E-10 | 5.551E-07 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 5.071E-10 | 4.527E-07 |
negative regulation of ligase activity | GO:0051352 |  | 5.506E-10 | 3.932E-07 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 5.971E-10 | 3.553E-07 |
protein kinase regulator activity | GO:0019887 |  | 5.971E-10 | 3.046E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 6.466E-10 | 2.886E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 7.555E-10 | 2.998E-07 |
positive regulation of ligase activity | GO:0051351 |  | 8.786E-10 | 3.137E-07 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.093E-09 | 3.547E-07 |
Parker_GPL887 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.378E-16 | 1.232E-12 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.374E-11 | 9.803E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 7.206E-11 | 8.763E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 8.694E-11 | 7.929E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 9.529E-11 | 6.953E-08 |
positive regulation of ligase activity | GO:0051351 |  | 1.14E-10 | 6.931E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.745E-10 | 9.092E-08 |
regulation of ligase activity | GO:0051340 |  | 2.221E-10 | 1.013E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 3.252E-10 | 1.318E-07 |
cyclin-dependent protein kinase regulator activity | GO:0016538 |  | 1.163E-09 | 4.242E-07 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 6.603E-09 | 2.19E-06 |
Pawitan_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.22E-17 | 2.935E-14 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.995E-12 | 4.806E-09 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.374E-12 | 3.508E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.694E-12 | 3.425E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.694E-12 | 2.74E-09 |
positive regulation of ligase activity | GO:0051351 |  | 8.623E-12 | 3.458E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.01E-11 | 3.472E-09 |
regulation of ligase activity | GO:0051340 |  | 1.474E-11 | 4.434E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.755E-11 | 7.364E-09 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 7.07E-10 | 1.701E-07 |
negative regulation of ligase activity | GO:0051352 |  | 7.628E-10 | 1.668E-07 |
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 2.175E-16 | 5.002E-13 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.672E-11 | 4.223E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.063E-11 | 3.115E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.448E-11 | 3.133E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.448E-11 | 2.506E-08 |
positive regulation of ligase activity | GO:0051351 |  | 7.887E-11 | 3.023E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.411E-11 | 3.092E-08 |
regulation of ligase activity | GO:0051340 |  | 1.32E-10 | 3.794E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 1.963E-10 | 5.017E-08 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 4.501E-09 | 1.035E-06 |
negative regulation of ligase activity | GO:0051352 |  | 4.9E-09 | 1.025E-06 |
Sotiriou file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 2.175E-16 | 5.002E-13 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.672E-11 | 4.223E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.063E-11 | 3.115E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.448E-11 | 3.133E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.448E-11 | 2.506E-08 |
positive regulation of ligase activity | GO:0051351 |  | 7.887E-11 | 3.023E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.411E-11 | 3.092E-08 |
regulation of ligase activity | GO:0051340 |  | 1.32E-10 | 3.794E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 1.963E-10 | 5.017E-08 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 4.501E-09 | 1.035E-06 |
negative regulation of ligase activity | GO:0051352 |  | 4.9E-09 | 1.025E-06 |
Van-De-Vijver file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.38E-10 | 2.544E-07 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.761E-10 | 1.623E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 1.981E-10 | 1.217E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.222E-10 | 1.024E-07 |
positive regulation of ligase activity | GO:0051351 |  | 2.222E-10 | 8.19E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.774E-10 | 8.521E-08 |
regulation of ligase activity | GO:0051340 |  | 3.089E-10 | 8.132E-08 |
proteasomal protein catabolic process | GO:0010498 |  | 9.608E-10 | 2.213E-07 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.944E-08 | 3.98E-06 |
negative regulation of ligase activity | GO:0051352 |  | 4.145E-08 | 7.638E-06 |
positive regulation of cell growth | GO:0030307 |  | 1.329E-05 | 2.226E-03 |
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 2.175E-16 | 5.002E-13 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.672E-11 | 4.223E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.063E-11 | 3.115E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.448E-11 | 3.133E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.448E-11 | 2.506E-08 |
positive regulation of ligase activity | GO:0051351 |  | 7.887E-11 | 3.023E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.411E-11 | 3.092E-08 |
regulation of ligase activity | GO:0051340 |  | 1.32E-10 | 3.794E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 1.963E-10 | 5.017E-08 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 4.501E-09 | 1.035E-06 |
negative regulation of ligase activity | GO:0051352 |  | 4.9E-09 | 1.025E-06 |
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 2.898E-16 | 6.878E-13 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.522E-11 | 6.552E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 7.948E-11 | 6.287E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 1.03E-10 | 6.11E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 1.03E-10 | 4.888E-08 |
positive regulation of ligase activity | GO:0051351 |  | 1.32E-10 | 5.221E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.675E-10 | 5.679E-08 |
regulation of ligase activity | GO:0051340 |  | 2.106E-10 | 6.248E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.626E-10 | 6.923E-08 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 6.736E-09 | 1.598E-06 |
negative regulation of ligase activity | GO:0051352 |  | 7.274E-09 | 1.569E-06 |