Study run-a2

Study informations

103 subnetworks in total page | file

306 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 5704-7-real

score

DatasetScoreP-val 1P-val 2P-val 3
Desmedt0.16311.391e-021.089e-021.131e-01
IPC-NIBC-1290.23875.719e-028.180e-024.833e-01
Ivshina_GPL96-GPL970.23381.577e-022.521e-023.471e-01
Loi_GPL5700.19321.288e-011.426e-014.399e-01
Loi_GPL96-GPL970.16376.000e-066.000e-053.000e-05
Parker_GPL13900.21876.150e-027.565e-024.402e-01
Parker_GPL8870.14994.493e-014.684e-015.020e-01
Pawitan_GPL96-GPL970.36153.410e-012.692e-018.977e-01
Schmidt0.22851.597e-021.819e-022.004e-01
Sotiriou0.28531.894e-021.477e-022.687e-01
Van-De-Vijver0.24711.017e-031.464e-035.937e-02
Zhang0.28441.271e-018.217e-022.683e-01
Zhou0.41946.557e-025.389e-023.876e-01

Expression data for subnetwork 5704-7-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Van-De-Vijver | Zhang | Zhou |

Subnetwork structure for each dataset

Score for each gene in subnetwork 5704-7-real in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPC-NIBC-129Ivshina_GPL96-GPL97Loi_GPL570Loi_GPL96-GPL97Parker_GPL1390Parker_GPL887Pawitan_GPL96-GPL97SchmidtSotiriouVan-De-VijverZhangZhou
cdkn3CDKN3 on ITI CDKN3 on NCBI53529220.1140.2690.1990.1360.1930.166-0.0090.3230.1860.1980.2010.2710.372
cdkn1aCDKN1A on ITI CDKN1A on NCBI447140.115-0.0200.0650.0820.0990.1240.0550.0870.0680.144undef-0.2010.069
psmd10PSMD10 on ITI PSMD10 on NCBI1116246248-0.0280.0990.1080.1300.1370.1190.1480.1530.0610.1910.0230.1350.184
tle1TLE1 on ITI TLE1 on NCBI476130.0620.235-0.032-0.1770.0330.0850.3390.0680.126-0.0270.1700.0680.025
ube2cUBE2C on ITI UBE2C on NCBI11162462480.1450.1760.1780.2230.211-0.0560.2610.3130.2500.214undef0.1470.316
ccnd1CCND1 on ITI CCND1 on NCBI92218120.127-0.1830.0620.1900.157-0.002-0.1900.105-0.1070.174undef0.1440.290
cks2CKS2 on ITI CKS2 on NCBI121834320.0500.2330.1700.1030.1860.1720.0930.1670.2630.1510.0800.2840.383
cdc2CDC2 on ITI CDC2 on NCBI961110.0730.2470.2060.1720.2470.153-0.1310.2820.2260.2210.1620.2970.336
psmc4PSMC4 on ITI PSMC4 on NCBI1116246248-0.0350.1180.1140.0040.0940.1320.0800.279-0.0320.0340.163-0.0400.231
cdc25aCDC25A on ITI CDC25A on NCBI8269579-0.0190.2210.0930.1580.120-0.0610.4060.2070.2110.016-0.0190.1830.264
anapc2ANAPC2 on ITI ANAPC2 on NCBI27834420.054-0.1060.034-0.0560.063-0.0390.4260.009-0.039-0.0110.1290.0740.213
sfnSFN on ITI SFN on NCBI613120.0770.1370.1110.1720.1120.1190.1410.2190.1000.1470.1580.0790.181

GO Enrichment output for subnetwork 5704-7-real in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.175E-165.002E-13
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.672E-114.223E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.063E-113.115E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.448E-113.133E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.448E-112.506E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO7.887E-113.023E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO9.411E-113.092E-08
regulation of ligase activityGO:0051340GO:0051340 on GO1.32E-103.794E-08
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO1.963E-105.017E-08
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO4.501E-091.035E-06
negative regulation of ligase activityGO:0051352GO:0051352 on GO4.9E-091.025E-06


IPC-NIBC-129 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.26E-173.078E-14
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.848E-124.7E-09
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.212E-123.43E-09
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.483E-123.349E-09
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.483E-122.679E-09
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.304E-123.381E-09
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO9.727E-123.395E-09
regulation of ligase activityGO:0051340GO:0051340 on GO1.42E-114.335E-09
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO2.652E-117.199E-09
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO6.698E-101.636E-07
negative regulation of ligase activityGO:0051352GO:0051352 on GO7.227E-101.605E-07


Ivshina_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.22E-172.935E-14
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.995E-124.806E-09
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.374E-123.508E-09
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.694E-123.425E-09
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.694E-122.74E-09
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.623E-123.458E-09
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.01E-113.472E-09
regulation of ligase activityGO:0051340GO:0051340 on GO1.474E-114.434E-09
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO2.755E-117.364E-09
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO7.07E-101.701E-07
negative regulation of ligase activityGO:0051352GO:0051352 on GO7.628E-101.668E-07


Loi_GPL570 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.26E-173.078E-14
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.848E-124.7E-09
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.212E-123.43E-09
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.483E-123.349E-09
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.483E-122.679E-09
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.304E-123.381E-09
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO9.727E-123.395E-09
regulation of ligase activityGO:0051340GO:0051340 on GO1.42E-114.335E-09
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO2.652E-117.199E-09
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO6.698E-101.636E-07
negative regulation of ligase activityGO:0051352GO:0051352 on GO7.227E-101.605E-07


Loi_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.22E-172.935E-14
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.995E-124.806E-09
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.374E-123.508E-09
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.694E-123.425E-09
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.694E-122.74E-09
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.623E-123.458E-09
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.01E-113.472E-09
regulation of ligase activityGO:0051340GO:0051340 on GO1.474E-114.434E-09
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO2.755E-117.364E-09
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO7.07E-101.701E-07
negative regulation of ligase activityGO:0051352GO:0051352 on GO7.628E-101.668E-07


Parker_GPL1390 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.599E-185.71E-15
cyclin-dependent protein kinase regulator activityGO:0016538GO:0016538 on GO5.533E-119.88E-08
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO4.663E-105.551E-07
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO5.071E-104.527E-07
negative regulation of ligase activityGO:0051352GO:0051352 on GO5.506E-103.932E-07
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO5.971E-103.553E-07
protein kinase regulator activityGO:0019887GO:0019887 on GO5.971E-103.046E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO6.466E-102.886E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO7.555E-102.998E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.786E-103.137E-07
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.093E-093.547E-07


Parker_GPL887 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.378E-161.232E-12
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO5.374E-119.803E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO7.206E-118.763E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO8.694E-117.929E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO9.529E-116.953E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO1.14E-106.931E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.745E-109.092E-08
regulation of ligase activityGO:0051340GO:0051340 on GO2.221E-101.013E-07
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO3.252E-101.318E-07
cyclin-dependent protein kinase regulator activityGO:0016538GO:0016538 on GO1.163E-094.242E-07
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO6.603E-092.19E-06


Pawitan_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.22E-172.935E-14
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.995E-124.806E-09
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.374E-123.508E-09
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.694E-123.425E-09
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.694E-122.74E-09
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.623E-123.458E-09
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.01E-113.472E-09
regulation of ligase activityGO:0051340GO:0051340 on GO1.474E-114.434E-09
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO2.755E-117.364E-09
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO7.07E-101.701E-07
negative regulation of ligase activityGO:0051352GO:0051352 on GO7.628E-101.668E-07


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.175E-165.002E-13
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.672E-114.223E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.063E-113.115E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.448E-113.133E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.448E-112.506E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO7.887E-113.023E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO9.411E-113.092E-08
regulation of ligase activityGO:0051340GO:0051340 on GO1.32E-103.794E-08
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO1.963E-105.017E-08
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO4.501E-091.035E-06
negative regulation of ligase activityGO:0051352GO:0051352 on GO4.9E-091.025E-06


Sotiriou file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.175E-165.002E-13
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.672E-114.223E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.063E-113.115E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.448E-113.133E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.448E-112.506E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO7.887E-113.023E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO9.411E-113.092E-08
regulation of ligase activityGO:0051340GO:0051340 on GO1.32E-103.794E-08
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO1.963E-105.017E-08
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO4.501E-091.035E-06
negative regulation of ligase activityGO:0051352GO:0051352 on GO4.9E-091.025E-06


Van-De-Vijver file

NameAccession NumberLinkP-valCorrected P-val
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO1.38E-102.544E-07
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.761E-101.623E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO1.981E-101.217E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.222E-101.024E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO2.222E-108.19E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO2.774E-108.521E-08
regulation of ligase activityGO:0051340GO:0051340 on GO3.089E-108.132E-08
proteasomal protein catabolic processGO:0010498GO:0010498 on GO9.608E-102.213E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.944E-083.98E-06
negative regulation of ligase activityGO:0051352GO:0051352 on GO4.145E-087.638E-06
positive regulation of cell growthGO:0030307GO:0030307 on GO1.329E-052.226E-03


Zhang file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.175E-165.002E-13
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO3.672E-114.223E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO4.063E-113.115E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO5.448E-113.133E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO5.448E-112.506E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO7.887E-113.023E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO9.411E-113.092E-08
regulation of ligase activityGO:0051340GO:0051340 on GO1.32E-103.794E-08
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO1.963E-105.017E-08
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO4.501E-091.035E-06
negative regulation of ligase activityGO:0051352GO:0051352 on GO4.9E-091.025E-06


Zhou file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.898E-166.878E-13
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO5.522E-116.552E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO7.948E-116.287E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO1.03E-106.11E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO1.03E-104.888E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO1.32E-105.221E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.675E-105.679E-08
regulation of ligase activityGO:0051340GO:0051340 on GO2.106E-106.248E-08
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO2.626E-106.923E-08
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051436GO:0051436 on GO6.736E-091.598E-06
negative regulation of ligase activityGO:0051352GO:0051352 on GO7.274E-091.569E-06


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