Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 55257-6-real
score
Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
Desmedt | 0.2016 | 1.108e-02 | 1.326e-02 | 1.070e-01 |
IPC-NIBC-129 | 0.2768 | 8.997e-02 | 1.181e-01 | 6.390e-01 |
Ivshina_GPL96-GPL97 | 0.2433 | 2.327e-03 | 4.149e-03 | 1.011e-01 |
Loi_GPL570 | 0.3108 | 4.255e-02 | 4.222e-02 | 2.260e-01 |
Loi_GPL96-GPL97 | 0.1615 | 1.500e-05 | 9.500e-05 | 1.470e-04 |
Parker_GPL1390 | 0.2151 | 9.607e-02 | 9.542e-02 | 5.304e-01 |
Parker_GPL887 | 0.2128 | 3.282e-01 | 3.626e-01 | 3.365e-01 |
Pawitan_GPL96-GPL97 | 0.3249 | 2.133e-01 | 1.759e-01 | 7.652e-01 |
Schmidt | 0.2330 | 1.479e-02 | 2.077e-02 | 1.758e-01 |
Sotiriou | 0.2912 | 9.706e-03 | 3.995e-03 | 1.592e-01 |
Wang | 0.1707 | 1.081e-01 | 7.530e-02 | 3.844e-01 |
Zhang | 0.1959 | 1.197e-01 | 8.119e-02 | 2.812e-01 |
Zhou | 0.3306 | 8.549e-02 | 9.316e-02 | 4.934e-01 |
Expression data for subnetwork 55257-6-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt

Score for each gene in subnetwork 55257-6-real in each dataset
Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
psmd2 |  | 7 | 38 | 37 | 28 | 0.147 | 0.322 | 0.122 | 0.146 | 0.143 | 0.246 | 0.444 | 0.194 | 0.318 | 0.151 | 0.154 | 0.042 | 0.207 |
cdkn1a |  | 70 | 3 | 73 | 51 | 0.115 | -0.020 | 0.065 | 0.082 | 0.099 | 0.124 | 0.055 | 0.087 | 0.068 | 0.144 | 0.015 | -0.201 | 0.069 |
psmd10 |  | 2 | 104 | 182 | 176 | -0.028 | 0.099 | 0.108 | 0.130 | 0.137 | 0.119 | 0.148 | 0.153 | 0.061 | 0.191 | 0.075 | 0.135 | 0.184 |
tubb |  | 8 | 33 | 93 | 80 | 0.107 | 0.221 | 0.070 | 0.090 | 0.095 | 0.278 | -0.325 | 0.185 | 0.139 | 0.202 | -0.061 | -0.142 | 0.101 |
plk1 |  | 6 | 43 | 141 | 122 | 0.067 | 0.281 | 0.012 | 0.128 | 0.123 | 0.100 | 0.577 | 0.100 | 0.190 | 0.044 | 0.028 | 0.040 | 0.410 |
ccnd1 |  | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
ndrg1 |  | 9 | 27 | 250 | 223 | 0.072 | 0.301 | 0.084 | 0.324 | 0.108 | 0.102 | 0.240 | 0.083 | 0.068 | 0.064 | 0.128 | 0.092 | -0.255 |
psmb1 |  | 2 | 104 | 302 | 292 | -0.084 | 0.204 | 0.091 | 0.162 | 0.086 | 0.071 | -0.061 | 0.032 | 0.172 | -0.075 | 0.033 | 0.186 | 0.207 |
ap1m2 |  | 2 | 104 | 302 | 292 | 0.053 | 0.096 | 0.104 | 0.225 | 0.133 | -0.069 | 0.199 | 0.172 | -0.096 | 0.120 | -0.037 | 0.079 | 0.215 |
cdc2 |  | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
psmb3 |  | 5 | 50 | 150 | 138 | 0.080 | 0.214 | 0.172 | 0.037 | 0.177 | -0.031 | -0.058 | 0.133 | 0.154 | 0.132 | 0.038 | 0.047 | 0.059 |
top2a |  | 11 | 21 | 93 | 76 | 0.147 | 0.183 | 0.185 | 0.100 | 0.206 | 0.014 | 0.035 | 0.309 | 0.261 | 0.183 | 0.072 | 0.234 | 0.273 |
slc20a1 |  | 7 | 38 | 37 | 28 | 0.041 | 0.039 | 0.109 | 0.170 | 0.101 | 0.121 | 0.326 | 0.086 | 0.048 | 0.124 | 0.121 | -0.050 | 0.299 |
c20orf20 |  | 1 | 164 | 302 | 307 | 0.008 | 0.146 | 0.044 | 0.110 | 0.093 | 0.099 | 0.101 | 0.045 | 0.208 | 0.128 | 0.177 | 0.094 | 0.184 |
pkmyt1 |  | 4 | 60 | 150 | 141 | 0.219 | 0.222 | 0.151 | 0.190 | 0.092 | undef | 0.460 | 0.202 | 0.156 | 0.061 | 0.117 | 0.288 | 0.257 |
GO Enrichment output for subnetwork 55257-6-real in each dataset
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.642E-12 | 3.777E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.319E-12 | 2.667E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.319E-12 | 1.778E-09 |
positive regulation of ligase activity | GO:0051351 |  | 3.581E-12 | 2.059E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.407E-12 | 2.027E-09 |
regulation of ligase activity | GO:0051340 |  | 6.555E-12 | 2.513E-09 |
spindle assembly | GO:0051225 |  | 1.364E-11 | 4.483E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.797E-10 | 5.167E-08 |
natural killer cell mediated immunity | GO:0002228 |  | 3.426E-10 | 8.755E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 8.956E-10 | 2.06E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.564E-10 | 2E-07 |
IPC-NIBC-129 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 8.704E-14 | 2.126E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 1.187E-13 | 1.449E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 1.187E-13 | 9.663E-11 |
positive regulation of ligase activity | GO:0051351 |  | 1.932E-13 | 1.18E-10 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.327E-13 | 1.137E-10 |
regulation of ligase activity | GO:0051340 |  | 3.626E-13 | 1.476E-10 |
spindle assembly | GO:0051225 |  | 1.539E-12 | 5.37E-10 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.425E-11 | 4.352E-09 |
natural killer cell mediated immunity | GO:0002228 |  | 6.445E-11 | 1.75E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.795E-11 | 2.393E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 1.518E-10 | 3.371E-08 |
Ivshina_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.074E-13 | 4.99E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.827E-13 | 3.401E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.827E-13 | 2.267E-10 |
positive regulation of ligase activity | GO:0051351 |  | 4.601E-13 | 2.768E-10 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 5.54E-13 | 2.666E-10 |
regulation of ligase activity | GO:0051340 |  | 8.631E-13 | 3.461E-10 |
spindle assembly | GO:0051225 |  | 2.559E-12 | 8.795E-10 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.014E-11 | 9.064E-09 |
natural killer cell mediated immunity | GO:0002228 |  | 1.071E-10 | 2.864E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.068E-10 | 4.975E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 2.522E-10 | 5.517E-08 |
Loi_GPL570 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 8.704E-14 | 2.126E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 1.187E-13 | 1.449E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 1.187E-13 | 9.663E-11 |
positive regulation of ligase activity | GO:0051351 |  | 1.932E-13 | 1.18E-10 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.327E-13 | 1.137E-10 |
regulation of ligase activity | GO:0051340 |  | 3.626E-13 | 1.476E-10 |
spindle assembly | GO:0051225 |  | 1.539E-12 | 5.37E-10 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.425E-11 | 4.352E-09 |
natural killer cell mediated immunity | GO:0002228 |  | 6.445E-11 | 1.75E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.795E-11 | 2.393E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 1.518E-10 | 3.371E-08 |
Loi_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.074E-13 | 4.99E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.827E-13 | 3.401E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.827E-13 | 2.267E-10 |
positive regulation of ligase activity | GO:0051351 |  | 4.601E-13 | 2.768E-10 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 5.54E-13 | 2.666E-10 |
regulation of ligase activity | GO:0051340 |  | 8.631E-13 | 3.461E-10 |
spindle assembly | GO:0051225 |  | 2.559E-12 | 8.795E-10 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.014E-11 | 9.064E-09 |
natural killer cell mediated immunity | GO:0002228 |  | 1.071E-10 | 2.864E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.068E-10 | 4.975E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 2.522E-10 | 5.517E-08 |
Parker_GPL1390 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 8.851E-12 | 3.161E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 9.747E-12 | 1.74E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 1.177E-11 | 1.401E-08 |
positive regulation of ligase activity | GO:0051351 |  | 1.412E-11 | 1.261E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.838E-11 | 1.313E-08 |
regulation of ligase activity | GO:0051340 |  | 2.568E-11 | 1.529E-08 |
proteasome complex | GO:0000502 |  | 3.35E-10 | 1.709E-07 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.291E-09 | 5.762E-07 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 1.403E-09 | 5.569E-07 |
negative regulation of ligase activity | GO:0051352 |  | 1.524E-09 | 5.441E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 6.629E-09 | 2.152E-06 |
Parker_GPL887 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 4.868E-14 | 1.776E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 6.075E-14 | 1.108E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 6.77E-14 | 8.232E-11 |
positive regulation of ligase activity | GO:0051351 |  | 8.364E-14 | 7.628E-11 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.382E-13 | 1.008E-10 |
regulation of ligase activity | GO:0051340 |  | 1.837E-13 | 1.117E-10 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 8.034E-12 | 4.187E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 4.885E-11 | 2.228E-08 |
proteasome complex | GO:0000502 |  | 3.825E-10 | 1.55E-07 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 1.435E-09 | 5.237E-07 |
negative regulation of ligase activity | GO:0051352 |  | 1.69E-09 | 5.604E-07 |
Pawitan_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.074E-13 | 4.99E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.827E-13 | 3.401E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.827E-13 | 2.267E-10 |
positive regulation of ligase activity | GO:0051351 |  | 4.601E-13 | 2.768E-10 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 5.54E-13 | 2.666E-10 |
regulation of ligase activity | GO:0051340 |  | 8.631E-13 | 3.461E-10 |
spindle assembly | GO:0051225 |  | 2.559E-12 | 8.795E-10 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.014E-11 | 9.064E-09 |
natural killer cell mediated immunity | GO:0002228 |  | 1.071E-10 | 2.864E-08 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.068E-10 | 4.975E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 2.522E-10 | 5.517E-08 |
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.642E-12 | 3.777E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.319E-12 | 2.667E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.319E-12 | 1.778E-09 |
positive regulation of ligase activity | GO:0051351 |  | 3.581E-12 | 2.059E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.407E-12 | 2.027E-09 |
regulation of ligase activity | GO:0051340 |  | 6.555E-12 | 2.513E-09 |
spindle assembly | GO:0051225 |  | 1.364E-11 | 4.483E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.797E-10 | 5.167E-08 |
natural killer cell mediated immunity | GO:0002228 |  | 3.426E-10 | 8.755E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 8.956E-10 | 2.06E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.564E-10 | 2E-07 |
Sotiriou file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.642E-12 | 3.777E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.319E-12 | 2.667E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.319E-12 | 1.778E-09 |
positive regulation of ligase activity | GO:0051351 |  | 3.581E-12 | 2.059E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.407E-12 | 2.027E-09 |
regulation of ligase activity | GO:0051340 |  | 6.555E-12 | 2.513E-09 |
spindle assembly | GO:0051225 |  | 1.364E-11 | 4.483E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.797E-10 | 5.167E-08 |
natural killer cell mediated immunity | GO:0002228 |  | 3.426E-10 | 8.755E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 8.956E-10 | 2.06E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.564E-10 | 2E-07 |
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.642E-12 | 3.777E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.319E-12 | 2.667E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.319E-12 | 1.778E-09 |
positive regulation of ligase activity | GO:0051351 |  | 3.581E-12 | 2.059E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.407E-12 | 2.027E-09 |
regulation of ligase activity | GO:0051340 |  | 6.555E-12 | 2.513E-09 |
spindle assembly | GO:0051225 |  | 1.364E-11 | 4.483E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.797E-10 | 5.167E-08 |
natural killer cell mediated immunity | GO:0002228 |  | 3.426E-10 | 8.755E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 8.956E-10 | 2.06E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.564E-10 | 2E-07 |
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.642E-12 | 3.777E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.319E-12 | 2.667E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.319E-12 | 1.778E-09 |
positive regulation of ligase activity | GO:0051351 |  | 3.581E-12 | 2.059E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.407E-12 | 2.027E-09 |
regulation of ligase activity | GO:0051340 |  | 6.555E-12 | 2.513E-09 |
spindle assembly | GO:0051225 |  | 1.364E-11 | 4.483E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.797E-10 | 5.167E-08 |
natural killer cell mediated immunity | GO:0002228 |  | 3.426E-10 | 8.755E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 8.956E-10 | 2.06E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9.564E-10 | 2E-07 |
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.623E-12 | 3.85E-09 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.2E-12 | 2.611E-09 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.2E-12 | 1.74E-09 |
positive regulation of ligase activity | GO:0051351 |  | 2.946E-12 | 1.748E-09 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.897E-12 | 1.85E-09 |
regulation of ligase activity | GO:0051340 |  | 5.1E-12 | 2.017E-09 |
spindle assembly | GO:0051225 |  | 2.442E-11 | 8.278E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.359E-10 | 4.032E-08 |
natural killer cell mediated immunity | GO:0002228 |  | 2.046E-10 | 5.395E-08 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 5.351E-10 | 1.27E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 6.446E-10 | 1.391E-07 |