Study VanDeVijver-ER-pos

Study informations

14 subnetworks in total page | file

272 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 139

score

Expression data for subnetwork 139 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 139 in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC	Loi	Schmidt	Wang
MCM10		1	59	1	15	0.025	0.151	0.120	0.173	0.095
MCM6		1	59	1	15	0.021	0.100	0.195	0.243	0.153
MUT		1	59	1	15	-0.051	-0.005	0.116	0.188	-0.012
LDOC1		1	59	1	15	0.183	0.115	0.105	0.071	-0.022
TAF1		1	59	1	15	-0.066	0.201	0.010	-0.089	-0.050
RIF1		3	13	1	5	-0.055	0.053	-0.056	-0.038	0.085
ERBB2		2	27	1	10	0.047	-0.012	0.088	0.191	-0.068
MCM7		1	59	1	15	0.103	0.083	0.146	0.144	0.142
PLAT		1	59	1	15	0.121	-0.076	-0.033	-0.205	0.181
SERPINB2		1	59	1	15	-0.093	0.133	-0.080	-0.042	-0.038
WEE1		2	27	1	10	0.186	-0.013	-0.003	0.043	0.146
RB1		1	59	1	15	-0.072	-0.005	0.009	-0.041	0.170
EIF2AK2		1	59	1	15	0.034	0.084	0.095	0.235	-0.037
PCNA		3	13	1	5	0.120	0.192	0.141	0.138	0.184
NEK6		1	59	1	15	undef	0.026	0.099	undef	undef
PLAU		1	59	1	15	0.114	0.162	-0.014	0.008	0.109
MYC		4	6	1	3	0.142	0.031	0.041	0.035	-0.138
ESD		1	59	1	15	-0.120	0.052	0.025	-0.107	-0.107
PDGFRB		3	13	1	5	0.116	-0.093	-0.038	-0.159	0.110
RASGRF1		1	59	1	15	-0.002	0.158	-0.083	-0.038	0.087
UTP15		1	59	1	15	undef	0.137	0.032	undef	undef
CDC6		2	27	1	10	0.102	0.134	0.211	0.284	0.078
KRAS		2	27	1	10	-0.041	0.147	0.088	0.259	0.018
CDK1		3	13	1	5	0.047	0.152	0.200	0.204	0.254
SCNM1		1	59	1	15	0.050	0.033	0.110	0.176	0.070
ITGB3BP		2	27	1	10	-0.116	0.163	0.090	-0.039	0.054
IGFBP5		4	6	1	3	0.142	0.011	0.158	0.087	-0.000
HSPB8		3	13	1	5	0.231	0.010	0.076	-0.044	0.013
EIF2S1		1	59	1	15	-0.133	0.037	0.017	0.293	0.161
PIK3C2B		1	59	1	15	-0.033	-0.129	-0.054	0.089	0.076
SERPINE1		1	59	1	15	0.179	-0.038	0.069	-0.136	-0.025
ESR1		6	2	1	1	0.125	0.032	0.114	-0.064	0.048
HSPB1		6	2	1	1	0.262	0.053	0.231	0.043	0.144
KRT18		1	59	1	15	0.157	0.038	0.150	0.021	0.070
CDKN3		1	59	1	15	0.108	0.156	0.191	0.208	0.269

GO Enrichment output for subnetwork 139 in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
G1 phase	GO:0051318		1.795E-07	4.128E-04
regulation of retinoic acid receptor signaling pathway	GO:0048385		3.271E-07	3.762E-04
protein amino acid autophosphorylation	GO:0046777		3.406E-07	2.611E-04
regulation of Rac protein signal transduction	GO:0035020		6.527E-07	3.753E-04
fibrinolysis	GO:0042730		1.14E-06	5.242E-04
platelet-derived growth factor receptor signaling pathway	GO:0048008		3.88E-06	1.487E-03
interphase of mitotic cell cycle	GO:0051329		8.771E-06	2.882E-03
interphase	GO:0051325		9.818E-06	2.823E-03
G1 phase of mitotic cell cycle	GO:0000080		1.166E-05	2.98E-03
negative regulation of blood coagulation	GO:0030195		1.166E-05	2.682E-03
DNA replication initiation	GO:0006270		1.786E-05	3.734E-03

IPC file

Name	Accession Number	Link	P-val	Corrected P-val
G1 phase	GO:0051318		1.304E-11	3.187E-08
protein amino acid autophosphorylation	GO:0046777		2.283E-10	2.788E-07
G1 phase of mitotic cell cycle	GO:0000080		8.849E-10	7.206E-07
interphase of mitotic cell cycle	GO:0051329		4.754E-09	2.903E-06
muscle cell migration	GO:0014812		1.411E-07	6.896E-05
regulation of retinoic acid receptor signaling pathway	GO:0048385		1.411E-07	5.747E-05
fibrinolysis	GO:0042730		4.922E-07	1.718E-04
regulation of Rac protein signal transduction	GO:0035020		7.862E-07	2.401E-04
transcription initiation	GO:0006352		4.222E-06	1.146E-03
stem cell development	GO:0048864		7.751E-06	1.894E-03
DNA replication initiation	GO:0006270		7.751E-06	1.721E-03

Loi file

Name	Accession Number	Link	P-val	Corrected P-val
G1 phase	GO:0051318		8.267E-12	1.989E-08
protein amino acid autophosphorylation	GO:0046777		2.689E-10	3.235E-07
G1 phase of mitotic cell cycle	GO:0000080		5.298E-10	4.249E-07
interphase of mitotic cell cycle	GO:0051329		7.135E-09	4.292E-06
interphase	GO:0051325		8.875E-09	4.271E-06
muscle cell migration	GO:0014812		1.867E-07	7.486E-05
regulation of retinoic acid receptor signaling pathway	GO:0048385		1.867E-07	6.417E-05
fibrinolysis	GO:0042730		6.509E-07	1.958E-04
regulation of Rac protein signal transduction	GO:0035020		1.039E-06	2.779E-04
transcription initiation	GO:0006352		5.651E-06	1.36E-03
stem cell development	GO:0048864		6.678E-06	1.461E-03

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
G1 phase	GO:0051318		1.795E-07	4.128E-04
regulation of retinoic acid receptor signaling pathway	GO:0048385		3.271E-07	3.762E-04
protein amino acid autophosphorylation	GO:0046777		3.406E-07	2.611E-04
regulation of Rac protein signal transduction	GO:0035020		6.527E-07	3.753E-04
fibrinolysis	GO:0042730		1.14E-06	5.242E-04
platelet-derived growth factor receptor signaling pathway	GO:0048008		3.88E-06	1.487E-03
interphase of mitotic cell cycle	GO:0051329		8.771E-06	2.882E-03
interphase	GO:0051325		9.818E-06	2.823E-03
G1 phase of mitotic cell cycle	GO:0000080		1.166E-05	2.98E-03
negative regulation of blood coagulation	GO:0030195		1.166E-05	2.682E-03
DNA replication initiation	GO:0006270		1.786E-05	3.734E-03

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
G1 phase	GO:0051318		1.795E-07	4.128E-04
regulation of retinoic acid receptor signaling pathway	GO:0048385		3.271E-07	3.762E-04
protein amino acid autophosphorylation	GO:0046777		3.406E-07	2.611E-04
regulation of Rac protein signal transduction	GO:0035020		6.527E-07	3.753E-04
fibrinolysis	GO:0042730		1.14E-06	5.242E-04
platelet-derived growth factor receptor signaling pathway	GO:0048008		3.88E-06	1.487E-03
interphase of mitotic cell cycle	GO:0051329		8.771E-06	2.882E-03
interphase	GO:0051325		9.818E-06	2.823E-03
G1 phase of mitotic cell cycle	GO:0000080		1.166E-05	2.98E-03
negative regulation of blood coagulation	GO:0030195		1.166E-05	2.682E-03
DNA replication initiation	GO:0006270		1.786E-05	3.734E-03