Study VanDeVijver-ER-pos

Study informations

14 subnetworks in total page | file

272 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 119

score

Dataset	Score	P-val 1	P-val 2	P-val 3	Fisher Score
Desmedt	0.5287	0.000e+00	0.000e+00	2.420e-04	0.000e+00
IPC	0.5688	2.609e-02	1.520e-02	9.449e-01	3.749e-04
Loi	0.4921	0.000e+00	1.000e-06	3.739e-03	0.000e+00
Schmidt	0.2849	1.836e-02	5.594e-03	3.411e-01	3.503e-05
Wang	0.3415	1.070e-04	2.000e-06	4.491e-02	9.610e-12

Expression data for subnetwork 119 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Desmedt IPC Loi Schmidt Wang

Desmedt

Score for each gene in subnetwork 119 in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC	Loi	Schmidt	Wang
DLG4		1	59	65	72	0.023	-0.178	-0.047	0.146	undef
FANCG		1	59	65	72	0.174	0.131	0.179	0.104	0.155
GUCY1A2		1	59	65	72	-0.071	0.134	0.016	0.008	-0.061
FZD2		1	59	65	72	0.137	-0.062	0.160	0.076	0.078
PPFIA1		1	59	65	72	0.226	0.129	0.107	0.064	0.208
DAZAP2		2	27	65	65	0.186	-0.174	0.074	-0.249	-0.046
PTPRG		1	59	65	72	0.104	-0.029	0.024	-0.125	-0.026
CCT5		2	27	65	65	0.122	0.132	0.196	0.122	0.139
TBC1D17		2	27	65	65	0.126	-0.165	0.100	-0.037	-0.031
HGS		1	59	65	72	0.194	0.010	0.109	0.071	0.004
PPP2R1A		2	27	65	65	0.215	-0.149	0.172	-0.047	-0.085
MST4		2	27	65	65	0.033	0.069	0.222	0.226	0.070
WWP1		2	27	65	65	0.154	-0.081	0.132	0.007	0.028
PPP2R2C		2	27	65	65	undef	-0.085	0.177	undef	undef
SPG20		2	27	36	41	-0.125	-0.029	0.009	-0.154	0.042
PDGFRB		3	13	1	5	0.116	-0.093	-0.038	-0.159	0.110
USHBP1		1	59	65	72	undef	-0.055	0.005	undef	undef

GO Enrichment output for subnetwork 119 in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of JAK-STAT cascade	GO:0046426		6.034E-08	1.388E-04
negative regulation of protein kinase cascade	GO:0010741		4.414E-06	5.076E-03
negative regulation of peptidyl-tyrosine phosphorylation	GO:0050732		1.508E-05	0.01156371
regulation of JAK-STAT cascade	GO:0046425		1.924E-05	0.01106041
establishment of tissue polarity	GO:0007164		2.261E-05	0.0103994
synaptic vesicle endocytosis	GO:0048488		3.163E-05	0.01212338
regulation of peptidyl-tyrosine phosphorylation	GO:0050730		6.541E-05	0.02149151
regulation of long-term neuronal synaptic plasticity	GO:0048169		6.762E-05	0.01943946
platelet-derived growth factor receptor signaling pathway	GO:0048008		6.762E-05	0.01727952
entry into host cell	GO:0030260		6.762E-05	0.01555157
ER-associated protein catabolic process	GO:0030433		8.258E-05	0.01726635

IPC file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of JAK-STAT cascade	GO:0046426		3.624E-08	8.852E-05
negative regulation of protein kinase cascade	GO:0010741		4.134E-06	5.05E-03
negative regulation of peptidyl-tyrosine phosphorylation	GO:0050732		1.052E-05	8.569E-03
retrograde protein transport. ER to cytosol	GO:0030970		1.052E-05	6.427E-03
regulation of JAK-STAT cascade	GO:0046425		1.739E-05	8.496E-03
establishment of tissue polarity	GO:0007164		2.207E-05	8.986E-03
regulation of long-term neuronal synaptic plasticity	GO:0048169		4.72E-05	0.01647178
synaptic vesicle endocytosis	GO:0048488		4.72E-05	0.01441281
regulation of peptidyl-tyrosine phosphorylation	GO:0050730		5.188E-05	0.0140837
entry into host cell	GO:0030260		6.913E-05	0.01688884
cGMP metabolic process	GO:0046068		8.165E-05	0.01813314

Loi file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of JAK-STAT cascade	GO:0046426		5.016E-08	1.207E-04
negative regulation of protein kinase cascade	GO:0010741		5.713E-06	6.873E-03
negative regulation of peptidyl-tyrosine phosphorylation	GO:0050732		1.309E-05	0.0104993
retrograde protein transport. ER to cytosol	GO:0030970		1.309E-05	7.874E-03
regulation of JAK-STAT cascade	GO:0046425		1.973E-05	9.494E-03
establishment of tissue polarity	GO:0007164		2.745E-05	0.01100817
synaptic vesicle endocytosis	GO:0048488		4.699E-05	0.01615165
regulation of long-term neuronal synaptic plasticity	GO:0048169		5.87E-05	0.01765296
regulation of peptidyl-tyrosine phosphorylation	GO:0050730		6.545E-05	0.01749691
entry into host cell	GO:0030260		8.596E-05	0.02068258
cGMP metabolic process	GO:0046068		1.015E-04	0.02220473

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of JAK-STAT cascade	GO:0046426		6.034E-08	1.388E-04
negative regulation of protein kinase cascade	GO:0010741		4.414E-06	5.076E-03
negative regulation of peptidyl-tyrosine phosphorylation	GO:0050732		1.508E-05	0.01156371
regulation of JAK-STAT cascade	GO:0046425		1.924E-05	0.01106041
establishment of tissue polarity	GO:0007164		2.261E-05	0.0103994
synaptic vesicle endocytosis	GO:0048488		3.163E-05	0.01212338
regulation of peptidyl-tyrosine phosphorylation	GO:0050730		6.541E-05	0.02149151
regulation of long-term neuronal synaptic plasticity	GO:0048169		6.762E-05	0.01943946
platelet-derived growth factor receptor signaling pathway	GO:0048008		6.762E-05	0.01727952
entry into host cell	GO:0030260		6.762E-05	0.01555157
ER-associated protein catabolic process	GO:0030433		8.258E-05	0.01726635

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of JAK-STAT cascade	GO:0046426		6.034E-08	1.388E-04
negative regulation of protein kinase cascade	GO:0010741		4.414E-06	5.076E-03
negative regulation of peptidyl-tyrosine phosphorylation	GO:0050732		1.508E-05	0.01156371
regulation of JAK-STAT cascade	GO:0046425		1.924E-05	0.01106041
establishment of tissue polarity	GO:0007164		2.261E-05	0.0103994
synaptic vesicle endocytosis	GO:0048488		3.163E-05	0.01212338
regulation of peptidyl-tyrosine phosphorylation	GO:0050730		6.541E-05	0.02149151
regulation of long-term neuronal synaptic plasticity	GO:0048169		6.762E-05	0.01943946
platelet-derived growth factor receptor signaling pathway	GO:0048008		6.762E-05	0.01727952
entry into host cell	GO:0030260		6.762E-05	0.01555157
ER-associated protein catabolic process	GO:0030433		8.258E-05	0.01726635