Study Desmedt-ER-pos
Study informations
6 subnetworks in total page | file
175 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 77
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 | Fisher Score |
|---|
| IPC | 0.6230 | 2.709e-02 | 8.067e-03 | 8.756e-01 | 1.913e-04 |
|---|
| Loi | 0.4879 | 5.000e-06 | 0.000e+00 | 3.474e-02 | 0.000e+00 |
|---|
| Schmidt | 0.4524 | 7.260e-04 | 3.500e-05 | 7.522e-01 | 1.911e-08 |
|---|
| VanDeVijver | 0.5988 | 1.000e-06 | 3.000e-06 | 3.514e-01 | 1.054e-12 |
|---|
| Wang | 0.2755 | 1.296e-03 | 2.918e-02 | 3.188e-01 | 1.205e-05 |
|---|
Expression data for subnetwork 77 in each dataset
IPC |
Loi |
Schmidt |
VanDeVijver |
Wang |
Subnetwork structure for each dataset
- IPC
Score for each gene in subnetwork 77 in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
IPC | Loi | Schmidt | VanDeVijver | Wang |
|---|
| DLGAP1 |   | 1 | 25 | 127 | 127 | 0.143 | 0.052 | -0.088 | -0.114 | 0.111 |
|---|
| UBQLN4 | | 2 | 9 | 61 | 65 | 0.088 | 0.080 | undef | 0.109 | undef |
|---|
| STAU1 | | 1 | 25 | 127 | 127 | 0.038 | 0.116 | 0.125 | -0.009 | 0.225 |
|---|
| PRDX6 | | 1 | 25 | 127 | 127 | 0.021 | 0.156 | 0.138 | -0.056 | 0.104 |
|---|
| TAF1D | | 1 | 25 | 127 | 127 | 0.073 | 0.011 | 0.010 | undef | 0.035 |
|---|
| CELSR3 | | 1 | 25 | 127 | 127 | 0.165 | 0.105 | 0.098 | undef | 0.076 |
|---|
| EDN1 | | 1 | 25 | 127 | 127 | -0.049 | -0.065 | 0.026 | -0.034 | -0.093 |
|---|
| DHX9 | | 1 | 25 | 127 | 127 | 0.035 | 0.148 | 0.125 | 0.012 | 0.021 |
|---|
| TAP1 | | 1 | 25 | 127 | 127 | -0.059 | 0.008 | 0.128 | 0.056 | -0.072 |
|---|
| AGR2 | | 2 | 9 | 61 | 65 | 0.056 | 0.223 | 0.057 | undef | 0.034 |
|---|
| CKMT2 | | 1 | 25 | 127 | 127 | 0.159 | 0.080 | 0.053 | 0.039 | -0.137 |
|---|
| EVPL | | 1 | 25 | 127 | 127 | 0.035 | 0.178 | 0.232 | 0.167 | -0.047 |
|---|
| CSTA | | 1 | 25 | 127 | 127 | 0.038 | 0.019 | 0.015 | 0.118 | -0.011 |
|---|
| GRB2 | | 4 | 1 | 1 | 1 | 0.037 | 0.087 | 0.182 | 0.183 | -0.037 |
|---|
| SPP1 | | 3 | 3 | 61 | 61 | 0.208 | 0.125 | -0.007 | 0.140 | 0.149 |
|---|
| DNAJC28 | | 1 | 25 | 127 | 127 | 0.091 | 0.046 | 0.043 | 0.063 | 0.094 |
|---|
| CCDC14 | | 1 | 25 | 127 | 127 | 0.128 | -0.014 | 0.035 | undef | 0.036 |
|---|
| PMEPA1 | | 1 | 25 | 127 | 127 | -0.040 | -0.052 | 0.027 | -0.063 | 0.114 |
|---|
| P4HB | | 1 | 25 | 127 | 127 | -0.065 | -0.000 | -0.126 | 0.214 | -0.012 |
|---|
| IGFBP5 | | 3 | 3 | 61 | 61 | 0.011 | 0.158 | 0.087 | 0.185 | -0.000 |
|---|
| GRB7 | | 1 | 25 | 127 | 127 | 0.034 | 0.061 | 0.189 | 0.171 | -0.053 |
|---|
| CSTF2 | | 2 | 9 | 61 | 65 | 0.087 | 0.183 | 0.016 | 0.134 | 0.153 |
|---|
| MAPK13 | | 1 | 25 | 127 | 127 | 0.030 | 0.034 | 0.099 | 0.191 | 0.093 |
|---|
| SERPINE1 | | 1 | 25 | 127 | 127 | -0.038 | 0.069 | -0.136 | 0.203 | -0.025 |
|---|
| CKB | | 1 | 25 | 127 | 127 | -0.138 | 0.130 | -0.056 | 0.016 | 0.157 |
|---|
| C11orf17 | | 1 | 25 | 127 | 127 | -0.001 | 0.093 | 0.018 | undef | 0.116 |
|---|
| HSPB1 | | 4 | 1 | 1 | 1 | 0.053 | 0.231 | 0.043 | 0.246 | 0.144 |
|---|
| PTN | | 1 | 25 | 127 | 127 | -0.036 | 0.013 | -0.038 | 0.178 | 0.000 |
|---|
| MAPT | | 1 | 25 | 127 | 127 | 0.082 | -0.014 | -0.142 | -0.030 | -0.119 |
|---|
| EPHX1 | | 1 | 25 | 127 | 127 | -0.177 | 0.132 | -0.034 | 0.114 | -0.044 |
|---|
GO Enrichment output for subnetwork 77 in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of axon extension | GO:0045773 |  | 1.655E-07 | 4.043E-04 |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.686E-07 | 2.06E-04 |
|---|
| positive regulation of microtubule polymerization | GO:0031116 | | 2.892E-07 | 2.355E-04 |
|---|
| positive regulation of microtubule polymerization or depolymerization | GO:0031112 | | 4.62E-07 | 2.822E-04 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 4.62E-07 | 2.257E-04 |
|---|
| phosphagen metabolic process | GO:0006599 | | 9.871E-07 | 4.019E-04 |
|---|
| regulation of axon extension | GO:0030516 | | 2.976E-06 | 1.039E-03 |
|---|
| positive regulation of protein polymerization | GO:0032273 | | 2.976E-06 | 9.089E-04 |
|---|
| positive regulation of axonogenesis | GO:0050772 | | 3.715E-06 | 1.008E-03 |
|---|
| negative regulation of microtubule depolymerization | GO:0007026 | | 5.536E-06 | 1.352E-03 |
|---|
| negative regulation of blood coagulation | GO:0030195 | | 5.536E-06 | 1.229E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.158E-07 | 2.786E-04 |
|---|
| positive regulation of axon extension | GO:0045773 | | 1.654E-07 | 1.99E-04 |
|---|
| positive regulation of microtubule polymerization | GO:0031116 | | 1.654E-07 | 1.327E-04 |
|---|
| positive regulation of microtubule polymerization or depolymerization | GO:0031112 | | 2.891E-07 | 1.739E-04 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 2.891E-07 | 1.391E-04 |
|---|
| phosphagen metabolic process | GO:0006599 | | 6.917E-07 | 2.774E-04 |
|---|
| positive regulation of protein polymerization | GO:0032273 | | 2.341E-06 | 8.047E-04 |
|---|
| regulation of axon extension | GO:0030516 | | 2.975E-06 | 8.949E-04 |
|---|
| positive regulation of axonogenesis | GO:0050772 | | 3.714E-06 | 9.929E-04 |
|---|
| negative regulation of microtubule depolymerization | GO:0007026 | | 4.564E-06 | 1.098E-03 |
|---|
| positive regulation of organelle organization | GO:0010638 | | 5.518E-06 | 1.207E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.488E-07 | 3.422E-04 |
|---|
| positive regulation of microtubule polymerization | GO:0031116 | | 1.935E-07 | 2.225E-04 |
|---|
| positive regulation of axon extension | GO:0045773 | | 3.863E-07 | 2.962E-04 |
|---|
| positive regulation of microtubule polymerization or depolymerization | GO:0031112 | | 3.863E-07 | 2.221E-04 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.863E-07 | 1.777E-04 |
|---|
| phosphagen metabolic process | GO:0006599 | | 1.613E-06 | 6.183E-04 |
|---|
| positive regulation of protein polymerization | GO:0032273 | | 1.613E-06 | 5.3E-04 |
|---|
| positive regulation of protein complex assembly | GO:0031334 | | 5.45E-06 | 1.567E-03 |
|---|
| regulation of axon extension | GO:0030516 | | 5.45E-06 | 1.393E-03 |
|---|
| negative regulation of microtubule depolymerization | GO:0007026 | | 6.923E-06 | 1.592E-03 |
|---|
| positive regulation of axonogenesis | GO:0050772 | | 6.923E-06 | 1.447E-03 |
|---|
VanDeVijver file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of blood coagulation | GO:0030195 | | 1.359E-06 | 2.505E-03 |
|---|
| negative regulation of coagulation | GO:0050819 | | 2.902E-06 | 2.674E-03 |
|---|
| peptide transport | GO:0015833 | | 8.733E-06 | 5.365E-03 |
|---|
| peptide cross-linking | GO:0018149 | | 8.733E-06 | 4.024E-03 |
|---|
| regulation of blood coagulation | GO:0030193 | | 8.733E-06 | 3.219E-03 |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.338E-05 | 4.111E-03 |
|---|
| regulation of coagulation | GO:0050818 | | 1.338E-05 | 3.523E-03 |
|---|
| regulation of smooth muscle cell proliferation | GO:0048660 | | 1.622E-05 | 3.736E-03 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.942E-05 | 3.977E-03 |
|---|
| keratinocyte differentiation | GO:0030216 | | 7.646E-05 | 0.01409177 |
|---|
| middle ear morphogenesis | GO:0042474 | | 8.825E-05 | 0.01478655 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.488E-07 | 3.422E-04 |
|---|
| positive regulation of microtubule polymerization | GO:0031116 | | 1.935E-07 | 2.225E-04 |
|---|
| positive regulation of axon extension | GO:0045773 | | 3.863E-07 | 2.962E-04 |
|---|
| positive regulation of microtubule polymerization or depolymerization | GO:0031112 | | 3.863E-07 | 2.221E-04 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.863E-07 | 1.777E-04 |
|---|
| phosphagen metabolic process | GO:0006599 | | 1.613E-06 | 6.183E-04 |
|---|
| positive regulation of protein polymerization | GO:0032273 | | 1.613E-06 | 5.3E-04 |
|---|
| positive regulation of protein complex assembly | GO:0031334 | | 5.45E-06 | 1.567E-03 |
|---|
| regulation of axon extension | GO:0030516 | | 5.45E-06 | 1.393E-03 |
|---|
| negative regulation of microtubule depolymerization | GO:0007026 | | 6.923E-06 | 1.592E-03 |
|---|
| positive regulation of axonogenesis | GO:0050772 | | 6.923E-06 | 1.447E-03 |
|---|
