Study run-a2
Study informations
103 subnetworks in total page | file
306 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 9261-11-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1690 | 1.359e-02 | 1.060e-02 | 1.110e-01 |
|---|
| IPC-NIBC-129 | 0.2210 | 4.615e-02 | 6.666e-02 | 4.229e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2350 | 6.820e-04 | 1.420e-03 | 5.008e-02 |
|---|
| Loi_GPL570 | 0.3836 | 8.391e-03 | 9.969e-03 | 4.658e-02 |
|---|
| Loi_GPL96-GPL97 | 0.1271 | 2.300e-05 | 1.750e-04 | 2.240e-04 |
|---|
| Parker_GPL1390 | 0.3621 | 1.161e-02 | 1.538e-02 | 1.625e-01 |
|---|
| Parker_GPL887 | 0.4003 | 4.338e-01 | 4.529e-01 | 4.832e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3524 | 2.240e-02 | 1.057e-02 | 1.937e-01 |
|---|
| Schmidt | 0.3433 | 2.715e-01 | 3.411e-01 | 8.696e-01 |
|---|
| Sotiriou | 0.2479 | 3.497e-02 | 2.784e-02 | 3.695e-01 |
|---|
| Van-De-Vijver | 0.2628 | 2.698e-03 | 3.873e-03 | 1.119e-01 |
|---|
| Zhang | 0.1063 | 2.185e-01 | 1.622e-01 | 4.148e-01 |
|---|
| Zhou | 0.3647 | 7.125e-02 | 6.004e-02 | 4.119e-01 |
|---|
Expression data for subnetwork 9261-11-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Van-De-Vijver |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 9261-11-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Van-De-Vijver | Zhang | Zhou |
|---|
| nfatc4 |   | 15 | 11 | 1 | 5 | 0.094 | -0.056 | -0.021 | 0.204 | 0.079 | -0.008 | 0.243 | 0.060 | 0.077 | -0.012 | 0.136 | 0.131 | 0.154 |
|---|
| irak1 | | 5 | 40 | 42 | 36 | -0.016 | 0.242 | 0.007 | 0.133 | 0.108 | 0.303 | 0.257 | 0.133 | 0.177 | 0.084 | 0.199 | -0.026 | 0.081 |
|---|
| ywhaz | | 17 | 10 | 29 | 25 | 0.124 | 0.089 | 0.087 | 0.200 | 0.141 | 0.110 | 0.228 | 0.199 | 0.056 | 0.123 | undef | 0.103 | 0.213 |
|---|
| mapk14 | | 4 | 50 | 1 | 10 | -0.062 | 0.058 | 0.135 | 0.204 | 0.086 | 0.061 | 0.389 | 0.068 | 0.246 | 0.068 | 0.076 | 0.011 | 0.192 |
|---|
| prkci | | 14 | 15 | 31 | 26 | 0.065 | 0.104 | 0.012 | 0.170 | 0.112 | 0.088 | -0.103 | -0.170 | 0.196 | 0.128 | 0.049 | 0.124 | 0.149 |
|---|
| fadd | | 4 | 50 | 42 | 40 | 0.121 | -0.009 | 0.155 | 0.307 | 0.166 | 0.119 | 0.084 | 0.300 | 0.070 | 0.116 | 0.051 | 0.032 | 0.243 |
|---|
| hspb1 | | 5 | 40 | 42 | 36 | 0.190 | -0.050 | 0.184 | 0.212 | 0.231 | -0.026 | -0.065 | 0.289 | -0.021 | 0.201 | 0.183 | -0.077 | 0.290 |
|---|
| gpsm2 | | 4 | 50 | 42 | 40 | 0.021 | 0.286 | 0.155 | 0.144 | 0.108 | 0.242 | 0.307 | 0.134 | 0.234 | 0.077 | 0.112 | 0.098 | 0.207 |
|---|
| hras | | 14 | 15 | 42 | 34 | 0.049 | -0.030 | 0.094 | 0.210 | 0.160 | 0.195 | 0.022 | 0.245 | 0.086 | 0.208 | 0.180 | 0.003 | 0.197 |
|---|
| mapkapk2 | | 3 | 62 | 42 | 45 | -0.050 | 0.102 | 0.156 | -0.116 | 0.090 | 0.168 | 0.303 | 0.074 | 0.171 | 0.117 | 0.092 | -0.124 | 0.312 |
|---|
| mdfi | | 7 | 30 | 42 | 35 | -0.050 | 0.215 | 0.036 | -0.005 | 0.054 | 0.263 | 0.176 | 0.130 | 0.296 | -0.041 | 0.074 | 0.076 | 0.056 |
|---|
| lrdd | | 3 | 62 | 42 | 45 | 0.075 | 0.117 | -0.015 | 0.179 | 0.068 | 0.006 | 0.302 | 0.104 | 0.152 | 0.007 | undef | 0.108 | 0.085 |
|---|
| naca | | 3 | 62 | 42 | 45 | 0.052 | 0.141 | 0.119 | 0.132 | 0.102 | -0.017 | -0.128 | 0.081 | 0.076 | 0.100 | -0.184 | 0.147 | 0.138 |
|---|
GO Enrichment output for subnetwork 9261-11-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 |  | 3.279E-08 | 7.541E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.376E-07 | 6.183E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.815E-06 | 1.392E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.68E-06 | 2.116E-03 |
|---|
| sperm motility | GO:0030317 | | 6.507E-06 | 2.993E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.169E-05 | 4.48E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.582E-05 | 5.197E-03 |
|---|
| Ras protein signal transduction | GO:0007265 | | 1.599E-05 | 4.596E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 1.904E-05 | 4.866E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.673E-05 | 6.149E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 3.433E-05 | 7.177E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 4.877E-09 | 1.192E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.389E-07 | 1.696E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.715E-07 | 2.211E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 1.254E-06 | 7.656E-04 |
|---|
| sperm motility | GO:0030317 | | 1.578E-06 | 7.709E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.384E-06 | 9.705E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.424E-06 | 1.195E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 5.487E-06 | 1.675E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 6.771E-06 | 1.838E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 9.622E-06 | 2.351E-03 |
|---|
| lipopolysaccharide-mediated signaling pathway | GO:0031663 | | 1.346E-05 | 2.99E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.187E-09 | 1.729E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.045E-07 | 2.461E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 3.997E-07 | 3.206E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 1.438E-06 | 8.647E-04 |
|---|
| sperm motility | GO:0030317 | | 1.633E-06 | 7.856E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 3.505E-06 | 1.406E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 5.034E-06 | 1.73E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 7.492E-06 | 2.253E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 8.063E-06 | 2.156E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 1.247E-05 | 3.001E-03 |
|---|
| lipopolysaccharide-mediated signaling pathway | GO:0031663 | | 1.745E-05 | 3.818E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 4.877E-09 | 1.192E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.389E-07 | 1.696E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.715E-07 | 2.211E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 1.254E-06 | 7.656E-04 |
|---|
| sperm motility | GO:0030317 | | 1.578E-06 | 7.709E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.384E-06 | 9.705E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.424E-06 | 1.195E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 5.487E-06 | 1.675E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 6.771E-06 | 1.838E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 9.622E-06 | 2.351E-03 |
|---|
| lipopolysaccharide-mediated signaling pathway | GO:0031663 | | 1.346E-05 | 2.99E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.187E-09 | 1.729E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.045E-07 | 2.461E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 3.997E-07 | 3.206E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 1.438E-06 | 8.647E-04 |
|---|
| sperm motility | GO:0030317 | | 1.633E-06 | 7.856E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 3.505E-06 | 1.406E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 5.034E-06 | 1.73E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 7.492E-06 | 2.253E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 8.063E-06 | 2.156E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 1.247E-05 | 3.001E-03 |
|---|
| lipopolysaccharide-mediated signaling pathway | GO:0031663 | | 1.745E-05 | 3.818E-03 |
|---|
Parker_GPL1390 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| death receptor binding | GO:0005123 | | 2.997E-08 | 1.07E-04 |
|---|
| Ras protein signal transduction | GO:0007265 | | 1.309E-06 | 2.337E-03 |
|---|
| tumor necrosis factor receptor superfamily binding | GO:0032813 | | 1.935E-06 | 2.303E-03 |
|---|
| SAP kinase activity | GO:0016909 | | 7.176E-06 | 6.406E-03 |
|---|
| lipopolysaccharide-mediated signaling pathway | GO:0031663 | | 1.076E-05 | 7.683E-03 |
|---|
| regulation of Rac protein signal transduction | GO:0035020 | | 1.076E-05 | 6.403E-03 |
|---|
| establishment of apical/basal cell polarity | GO:0035089 | | 1.076E-05 | 5.488E-03 |
|---|
| receptor signaling protein serine/threonine kinase activity | GO:0004702 | | 1.448E-05 | 6.463E-03 |
|---|
| eye photoreceptor cell differentiation | GO:0001754 | | 1.505E-05 | 5.973E-03 |
|---|
| regulation of synaptic transmission. GABAergic | GO:0032228 | | 1.505E-05 | 5.376E-03 |
|---|
| positive regulation of small GTPase mediated signal transduction | GO:0051057 | | 2.006E-05 | 6.513E-03 |
|---|
Parker_GPL887 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| death receptor binding | GO:0005123 | | 1.861E-08 | 6.787E-05 |
|---|
| Ras protein signal transduction | GO:0007265 | | 5.5E-07 | 1.003E-03 |
|---|
| tumor necrosis factor receptor superfamily binding | GO:0032813 | | 1.203E-06 | 1.463E-03 |
|---|
| NF-kappaB-inducing kinase activity | GO:0004704 | | 5.187E-06 | 4.731E-03 |
|---|
| SAP kinase activity | GO:0016909 | | 7.777E-06 | 5.674E-03 |
|---|
| regulation of synaptic transmission. GABAergic | GO:0032228 | | 7.777E-06 | 4.729E-03 |
|---|
| receptor signaling protein serine/threonine kinase activity | GO:0004702 | | 1.003E-05 | 5.226E-03 |
|---|
| dorsal/ventral axis specification | GO:0009950 | | 1.088E-05 | 4.963E-03 |
|---|
| regulation of long-term neuronal synaptic plasticity | GO:0048169 | | 1.088E-05 | 4.411E-03 |
|---|
| establishment or maintenance of epithelial cell apical/basal polarity | GO:0045197 | | 1.088E-05 | 3.97E-03 |
|---|
| regulation of Rac protein signal transduction | GO:0035020 | | 1.088E-05 | 3.609E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.187E-09 | 1.729E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.045E-07 | 2.461E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 3.997E-07 | 3.206E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 1.438E-06 | 8.647E-04 |
|---|
| sperm motility | GO:0030317 | | 1.633E-06 | 7.856E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 3.505E-06 | 1.406E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 5.034E-06 | 1.73E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 7.492E-06 | 2.253E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 8.063E-06 | 2.156E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 1.247E-05 | 3.001E-03 |
|---|
| lipopolysaccharide-mediated signaling pathway | GO:0031663 | | 1.745E-05 | 3.818E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.279E-08 | 7.541E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.376E-07 | 6.183E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.815E-06 | 1.392E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.68E-06 | 2.116E-03 |
|---|
| sperm motility | GO:0030317 | | 6.507E-06 | 2.993E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.169E-05 | 4.48E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.582E-05 | 5.197E-03 |
|---|
| Ras protein signal transduction | GO:0007265 | | 1.599E-05 | 4.596E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 1.904E-05 | 4.866E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.673E-05 | 6.149E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 3.433E-05 | 7.177E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.279E-08 | 7.541E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.376E-07 | 6.183E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.815E-06 | 1.392E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.68E-06 | 2.116E-03 |
|---|
| sperm motility | GO:0030317 | | 6.507E-06 | 2.993E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.169E-05 | 4.48E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.582E-05 | 5.197E-03 |
|---|
| Ras protein signal transduction | GO:0007265 | | 1.599E-05 | 4.596E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 1.904E-05 | 4.866E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.673E-05 | 6.149E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 3.433E-05 | 7.177E-03 |
|---|
Van-De-Vijver file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| Ras protein signal transduction | GO:0007265 | | 2.576E-06 | 4.747E-03 |
|---|
| regulation of long-term neuronal synaptic plasticity | GO:0048169 | | 2.318E-05 | 0.02136177 |
|---|
| establishment or maintenance of epithelial cell apical/basal polarity | GO:0045197 | | 2.318E-05 | 0.01424118 |
|---|
| activation of NF-kappaB-inducing kinase activity | GO:0007250 | | 2.318E-05 | 0.01068088 |
|---|
| regulation of Rac protein signal transduction | GO:0035020 | | 2.318E-05 | 8.545E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 2.318E-05 | 7.121E-03 |
|---|
| cytoplasmic sequestering of transcription factor | GO:0042994 | | 3.474E-05 | 9.147E-03 |
|---|
| establishment or maintenance of apical/basal cell polarity | GO:0035088 | | 3.474E-05 | 8.004E-03 |
|---|
| regulation of synaptic transmission. GABAergic | GO:0032228 | | 3.474E-05 | 7.114E-03 |
|---|
| axis specification | GO:0009798 | | 4.86E-05 | 8.956E-03 |
|---|
| visual behavior | GO:0007632 | | 4.86E-05 | 8.142E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.279E-08 | 7.541E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.376E-07 | 6.183E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.815E-06 | 1.392E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.68E-06 | 2.116E-03 |
|---|
| sperm motility | GO:0030317 | | 6.507E-06 | 2.993E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.169E-05 | 4.48E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.582E-05 | 5.197E-03 |
|---|
| Ras protein signal transduction | GO:0007265 | | 1.599E-05 | 4.596E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 1.904E-05 | 4.866E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.673E-05 | 6.149E-03 |
|---|
| photoreceptor cell development | GO:0042461 | | 3.433E-05 | 7.177E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 2.227E-08 | 5.285E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 4.869E-07 | 5.777E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.498E-06 | 1.185E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.378E-06 | 2.004E-03 |
|---|
| sperm motility | GO:0030317 | | 5.682E-06 | 2.697E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 9.779E-06 | 3.868E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.298E-05 | 4.401E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 1.681E-05 | 4.987E-03 |
|---|
| establishment of apical/basal cell polarity | GO:0035089 | | 1.77E-05 | 4.668E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.132E-05 | 5.059E-03 |
|---|
| regulation of Rac protein signal transduction | GO:0035020 | | 2.653E-05 | 5.724E-03 |
|---|
