Study run-a2
Study informations
103 subnetworks in total page | file
306 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 81848-9-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.2491 | 7.423e-03 | 5.339e-03 | 6.861e-02 |
|---|
| IPC-NIBC-129 | 0.2904 | 5.396e-02 | 7.738e-02 | 4.665e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2643 | 1.887e-03 | 3.615e-03 | 9.952e-02 |
|---|
| Loi_GPL570 | 0.2830 | 3.659e-02 | 4.197e-02 | 1.696e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1546 | 0.000e+00 | 2.000e-06 | 0.000e+00 |
|---|
| Parker_GPL1390 | 0.3161 | 5.999e-02 | 7.389e-02 | 4.345e-01 |
|---|
| Parker_GPL887 | 0.4005 | 2.650e-01 | 2.823e-01 | 2.753e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3516 | 2.233e-02 | 1.053e-02 | 1.933e-01 |
|---|
| Schmidt | 0.2302 | 7.903e-02 | 9.838e-02 | 5.339e-01 |
|---|
| Sotiriou | 0.3580 | 5.634e-03 | 4.239e-03 | 1.347e-01 |
|---|
| Van-De-Vijver | 0.2514 | 2.078e-03 | 2.987e-03 | 9.481e-02 |
|---|
| Zhang | 0.1859 | 1.455e-01 | 9.742e-02 | 2.999e-01 |
|---|
| Zhou | 0.3794 | 7.179e-02 | 6.063e-02 | 4.142e-01 |
|---|
Expression data for subnetwork 81848-9-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Van-De-Vijver |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 81848-9-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Van-De-Vijver | Zhang | Zhou |
|---|
| pgk1 |   | 5 | 40 | 18 | 23 | 0.141 | 0.293 | 0.135 | 0.197 | 0.170 | 0.170 | 0.120 | 0.310 | 0.201 | 0.127 | -0.046 | 0.054 | 0.141 |
|---|
| cfl1 | | 8 | 26 | 18 | 16 | 0.216 | 0.134 | 0.083 | -0.084 | 0.142 | 0.251 | -0.466 | 0.229 | 0.174 | 0.188 | 0.208 | -0.025 | 0.215 |
|---|
| ccnd1 | | 92 | 2 | 18 | 12 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | undef | 0.144 | 0.290 |
|---|
| tsc1 | | 58 | 4 | 18 | 13 | 0.049 | 0.012 | -0.055 | 0.072 | 0.055 | -0.144 | -0.242 | -0.196 | 0.006 | 0.010 | 0.095 | -0.007 | 0.207 |
|---|
| map4 | | 6 | 35 | 18 | 20 | 0.002 | 0.046 | 0.067 | -0.043 | 0.034 | 0.119 | 0.159 | -0.058 | -0.020 | 0.043 | 0.054 | -0.074 | 0.302 |
|---|
| gapdh | | 6 | 35 | 18 | 20 | 0.071 | 0.312 | 0.102 | 0.145 | 0.165 | 0.172 | -0.253 | 0.288 | 0.064 | 0.213 | 0.225 | -0.088 | 0.235 |
|---|
| cdc2 | | 96 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.162 | 0.297 | 0.336 |
|---|
| hsph1 | | 8 | 26 | 18 | 16 | 0.071 | 0.260 | 0.138 | 0.050 | 0.148 | 0.197 | -0.116 | 0.161 | 0.143 | 0.132 | -0.006 | 0.094 | 0.357 |
|---|
| tpi1 | | 1 | 116 | 18 | 38 | 0.094 | 0.214 | 0.149 | 0.126 | 0.126 | 0.172 | -0.377 | 0.178 | 0.040 | 0.129 | undef | -0.000 | 0.192 |
|---|
| tesk1 | | 7 | 30 | 18 | 19 | 0.110 | 0.169 | 0.161 | 0.179 | 0.096 | 0.138 | -0.154 | 0.245 | 0.155 | 0.092 | 0.067 | 0.029 | 0.200 |
|---|
| ube2a | | 2 | 78 | 18 | 33 | 0.114 | 0.159 | 0.138 | 0.203 | 0.117 | 0.220 | 0.156 | 0.164 | 0.177 | 0.171 | 0.133 | 0.095 | 0.168 |
|---|
| spry4 | | 5 | 40 | 18 | 23 | -0.033 | 0.158 | -0.001 | -0.039 | 0.103 | 0.074 | -0.328 | 0.022 | 0.197 | 0.156 | undef | 0.184 | 0.211 |
|---|
GO Enrichment output for subnetwork 81848-9-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 |  | 3.316E-13 | 7.626E-10 |
|---|
| glucose catabolic process | GO:0006007 | | 1.517E-12 | 1.745E-09 |
|---|
| hexose catabolic process | GO:0019320 | | 5.268E-12 | 4.039E-09 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.12E-11 | 6.439E-09 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.651E-11 | 1.219E-08 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 7.803E-11 | 2.991E-08 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 3.279E-08 | 1.077E-05 |
|---|
| substrate-bound cell migration | GO:0006929 | | 2.743E-07 | 7.885E-05 |
|---|
| regulation of cytoskeleton organization | GO:0051493 | | 1.199E-05 | 3.065E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.291E-05 | 5.268E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 2.291E-05 | 4.789E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 2.465E-14 | 6.023E-11 |
|---|
| glucose catabolic process | GO:0006007 | | 1.061E-13 | 1.296E-10 |
|---|
| hexose catabolic process | GO:0019320 | | 4.398E-13 | 3.581E-10 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.084E-12 | 6.621E-10 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.616E-12 | 1.278E-09 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 8.734E-09 | 3.556E-06 |
|---|
| neural plate morphogenesis | GO:0001839 | | 8.734E-09 | 3.048E-06 |
|---|
| neural plate development | GO:0001840 | | 1.746E-08 | 5.331E-06 |
|---|
| substrate-bound cell migration | GO:0006929 | | 1.435E-07 | 3.896E-05 |
|---|
| establishment of cell polarity | GO:0030010 | | 1.912E-07 | 4.672E-05 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 2.062E-07 | 4.579E-05 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 3.334E-14 | 8.022E-11 |
|---|
| glucose catabolic process | GO:0006007 | | 1.48E-13 | 1.781E-10 |
|---|
| hexose catabolic process | GO:0019320 | | 6.288E-13 | 5.043E-10 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.571E-12 | 9.447E-10 |
|---|
| alcohol catabolic process | GO:0046164 | | 3.832E-12 | 1.844E-09 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 1.088E-08 | 4.363E-06 |
|---|
| substrate-bound cell migration | GO:0006929 | | 1.787E-07 | 6.143E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.092E-05 | 3.283E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.092E-05 | 2.918E-03 |
|---|
| neural plate development | GO:0001840 | | 1.092E-05 | 2.626E-03 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 1.942E-05 | 4.247E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 2.465E-14 | 6.023E-11 |
|---|
| glucose catabolic process | GO:0006007 | | 1.061E-13 | 1.296E-10 |
|---|
| hexose catabolic process | GO:0019320 | | 4.398E-13 | 3.581E-10 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.084E-12 | 6.621E-10 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.616E-12 | 1.278E-09 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 8.734E-09 | 3.556E-06 |
|---|
| neural plate morphogenesis | GO:0001839 | | 8.734E-09 | 3.048E-06 |
|---|
| neural plate development | GO:0001840 | | 1.746E-08 | 5.331E-06 |
|---|
| substrate-bound cell migration | GO:0006929 | | 1.435E-07 | 3.896E-05 |
|---|
| establishment of cell polarity | GO:0030010 | | 1.912E-07 | 4.672E-05 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 2.062E-07 | 4.579E-05 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 3.334E-14 | 8.022E-11 |
|---|
| glucose catabolic process | GO:0006007 | | 1.48E-13 | 1.781E-10 |
|---|
| hexose catabolic process | GO:0019320 | | 6.288E-13 | 5.043E-10 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.571E-12 | 9.447E-10 |
|---|
| alcohol catabolic process | GO:0046164 | | 3.832E-12 | 1.844E-09 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 1.088E-08 | 4.363E-06 |
|---|
| substrate-bound cell migration | GO:0006929 | | 1.787E-07 | 6.143E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.092E-05 | 3.283E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.092E-05 | 2.918E-03 |
|---|
| neural plate development | GO:0001840 | | 1.092E-05 | 2.626E-03 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 1.942E-05 | 4.247E-03 |
|---|
Parker_GPL1390 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 1.855E-08 | 6.623E-05 |
|---|
| glucose catabolic process | GO:0006007 | | 4.469E-08 | 7.979E-05 |
|---|
| hexose catabolic process | GO:0019320 | | 9.174E-08 | 1.092E-04 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.592E-07 | 1.422E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.884E-07 | 1.345E-04 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.583E-07 | 1.537E-04 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 4.954E-07 | 2.527E-04 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 4.032E-06 | 1.8E-03 |
|---|
| neural plate development | GO:0001840 | | 5.061E-06 | 2.008E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 5.061E-06 | 1.807E-03 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 5.061E-06 | 1.643E-03 |
|---|
Parker_GPL887 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 9.676E-09 | 3.53E-05 |
|---|
| glucose catabolic process | GO:0006007 | | 2.194E-08 | 4.001E-05 |
|---|
| hexose catabolic process | GO:0019320 | | 4.322E-08 | 5.256E-05 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 7.71E-08 | 7.031E-05 |
|---|
| alcohol catabolic process | GO:0046164 | | 1.277E-07 | 9.319E-05 |
|---|
| regulation of cytoskeleton organization | GO:0051493 | | 2.741E-07 | 1.666E-04 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 3.115E-07 | 1.623E-04 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 2.813E-06 | 1.283E-03 |
|---|
| neural plate morphogenesis | GO:0001839 | | 3.763E-06 | 1.525E-03 |
|---|
| positive regulation of cell-matrix adhesion | GO:0001954 | | 3.763E-06 | 1.373E-03 |
|---|
| RNA polymerase II carboxy-terminal domain kinase activity | GO:0008353 | | 3.763E-06 | 1.248E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 3.334E-14 | 8.022E-11 |
|---|
| glucose catabolic process | GO:0006007 | | 1.48E-13 | 1.781E-10 |
|---|
| hexose catabolic process | GO:0019320 | | 6.288E-13 | 5.043E-10 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.571E-12 | 9.447E-10 |
|---|
| alcohol catabolic process | GO:0046164 | | 3.832E-12 | 1.844E-09 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 1.088E-08 | 4.363E-06 |
|---|
| substrate-bound cell migration | GO:0006929 | | 1.787E-07 | 6.143E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.092E-05 | 3.283E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.092E-05 | 2.918E-03 |
|---|
| neural plate development | GO:0001840 | | 1.092E-05 | 2.626E-03 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 1.942E-05 | 4.247E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 3.316E-13 | 7.626E-10 |
|---|
| glucose catabolic process | GO:0006007 | | 1.517E-12 | 1.745E-09 |
|---|
| hexose catabolic process | GO:0019320 | | 5.268E-12 | 4.039E-09 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.12E-11 | 6.439E-09 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.651E-11 | 1.219E-08 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 7.803E-11 | 2.991E-08 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 3.279E-08 | 1.077E-05 |
|---|
| substrate-bound cell migration | GO:0006929 | | 2.743E-07 | 7.885E-05 |
|---|
| regulation of cytoskeleton organization | GO:0051493 | | 1.199E-05 | 3.065E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.291E-05 | 5.268E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 2.291E-05 | 4.789E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 3.316E-13 | 7.626E-10 |
|---|
| glucose catabolic process | GO:0006007 | | 1.517E-12 | 1.745E-09 |
|---|
| hexose catabolic process | GO:0019320 | | 5.268E-12 | 4.039E-09 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.12E-11 | 6.439E-09 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.651E-11 | 1.219E-08 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 7.803E-11 | 2.991E-08 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 3.279E-08 | 1.077E-05 |
|---|
| substrate-bound cell migration | GO:0006929 | | 2.743E-07 | 7.885E-05 |
|---|
| regulation of cytoskeleton organization | GO:0051493 | | 1.199E-05 | 3.065E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.291E-05 | 5.268E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 2.291E-05 | 4.789E-03 |
|---|
Van-De-Vijver file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cytoskeleton organization | GO:0051493 | | 8.288E-07 | 1.527E-03 |
|---|
| glycolysis | GO:0006096 | | 3.965E-06 | 3.654E-03 |
|---|
| regulation of protein complex disassembly | GO:0043244 | | 6.176E-06 | 3.794E-03 |
|---|
| glucose catabolic process | GO:0006007 | | 7.535E-06 | 3.472E-03 |
|---|
| hexose catabolic process | GO:0019320 | | 1.277E-05 | 4.705E-03 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 1.518E-05 | 4.663E-03 |
|---|
| postreplication repair | GO:0006301 | | 1.518E-05 | 3.997E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 1.518E-05 | 3.498E-03 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.61E-05 | 3.297E-03 |
|---|
| alcohol catabolic process | GO:0046164 | | 1.861E-05 | 3.43E-03 |
|---|
| regulation of actin cytoskeleton organization | GO:0032956 | | 2.137E-05 | 3.581E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 3.316E-13 | 7.626E-10 |
|---|
| glucose catabolic process | GO:0006007 | | 1.517E-12 | 1.745E-09 |
|---|
| hexose catabolic process | GO:0019320 | | 5.268E-12 | 4.039E-09 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.12E-11 | 6.439E-09 |
|---|
| alcohol catabolic process | GO:0046164 | | 2.651E-11 | 1.219E-08 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 7.803E-11 | 2.991E-08 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 3.279E-08 | 1.077E-05 |
|---|
| substrate-bound cell migration | GO:0006929 | | 2.743E-07 | 7.885E-05 |
|---|
| regulation of cytoskeleton organization | GO:0051493 | | 1.199E-05 | 3.065E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.291E-05 | 5.268E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 2.291E-05 | 4.789E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| glycolysis | GO:0006096 | | 1.482E-17 | 3.517E-14 |
|---|
| glucose catabolic process | GO:0006007 | | 1.056E-16 | 1.253E-13 |
|---|
| hexose catabolic process | GO:0019320 | | 4.602E-16 | 3.641E-13 |
|---|
| monosaccharide catabolic process | GO:0046365 | | 1.134E-15 | 6.73E-13 |
|---|
| alcohol catabolic process | GO:0046164 | | 3.208E-15 | 1.522E-12 |
|---|
| carbohydrate catabolic process | GO:0016052 | | 1.31E-14 | 5.181E-12 |
|---|
| substrate-bound cell migration. cell extension | GO:0006930 | | 2.782E-08 | 9.431E-06 |
|---|
| substrate-bound cell migration | GO:0006929 | | 3.322E-07 | 9.854E-05 |
|---|
| pentose-phosphate shunt | GO:0006098 | | 4.563E-07 | 1.203E-04 |
|---|
| NADP metabolic process | GO:0006739 | | 1.541E-06 | 3.657E-04 |
|---|
| gluconeogenesis | GO:0006094 | | 4.213E-06 | 9.09E-04 |
|---|
