Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 5683-7-real
score
Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
Desmedt | 0.1210 | 9.549e-03 | 1.141e-02 | 9.571e-02 |
IPC-NIBC-129 | 0.2543 | 1.055e-01 | 1.392e-01 | 6.906e-01 |
Ivshina_GPL96-GPL97 | 0.2505 | 1.393e-02 | 2.075e-02 | 3.194e-01 |
Loi_GPL570 | 0.2274 | 5.798e-02 | 5.757e-02 | 2.840e-01 |
Loi_GPL96-GPL97 | 0.1848 | 1.300e-04 | 6.250e-04 | 3.065e-03 |
Parker_GPL1390 | 0.2033 | 2.856e-01 | 3.063e-01 | 8.254e-01 |
Parker_GPL887 | 0.0703 | 7.608e-01 | 7.825e-01 | 8.166e-01 |
Pawitan_GPL96-GPL97 | 0.3584 | 1.015e-01 | 7.438e-02 | 5.229e-01 |
Schmidt | 0.2018 | 1.951e-02 | 2.705e-02 | 2.151e-01 |
Sotiriou | 0.2742 | 3.231e-03 | 1.000e-03 | 7.491e-02 |
Wang | 0.2469 | 7.424e-02 | 4.857e-02 | 2.998e-01 |
Zhang | 0.2698 | 3.963e-02 | 2.162e-02 | 1.018e-01 |
Zhou | 0.3974 | 6.230e-02 | 6.599e-02 | 3.841e-01 |
Expression data for subnetwork 5683-7-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt

Score for each gene in subnetwork 5683-7-real in each dataset
Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
cdkn3 |  | 15 | 15 | 128 | 104 | 0.114 | 0.269 | 0.199 | 0.136 | 0.193 | 0.166 | -0.009 | 0.323 | 0.186 | 0.198 | 0.134 | 0.271 | 0.372 |
psma6 |  | 1 | 164 | 376 | 376 | 0.013 | 0.229 | 0.165 | 0.171 | 0.108 | 0.057 | -0.121 | 0.235 | 0.133 | 0.047 | 0.127 | 0.187 | 0.166 |
psma2 |  | 1 | 164 | 376 | 376 | 0.014 | 0.156 | 0.083 | 0.076 | 0.112 | -0.047 | -0.337 | 0.225 | 0.124 | 0.027 | 0.141 | 0.015 | 0.110 |
ccnb1 |  | 36 | 7 | 78 | 59 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.099 | 0.126 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 | 0.398 |
ccnd1 |  | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
pkd1 |  | 9 | 27 | 234 | 205 | -0.021 | 0.055 | 0.007 | 0.037 | 0.071 | 0.184 | 0.256 | -0.217 | -0.068 | -0.001 | 0.046 | 0.077 | 0.151 |
psma4 |  | 1 | 164 | 376 | 376 | -0.111 | 0.103 | 0.163 | 0.092 | 0.144 | 0.131 | -0.107 | 0.140 | 0.151 | 0.105 | 0.088 | 0.118 | 0.060 |
cdc2 |  | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
cdc25a |  | 9 | 27 | 109 | 90 | -0.019 | 0.221 | 0.093 | 0.158 | 0.120 | -0.061 | 0.406 | 0.207 | 0.211 | 0.016 | 0.069 | 0.183 | 0.264 |
actn1 |  | 4 | 60 | 1 | 9 | 0.100 | 0.223 | 0.031 | -0.052 | 0.053 | 0.156 | 0.031 | 0.019 | 0.024 | 0.027 | 0.124 | -0.008 | 0.241 |
psma7 |  | 1 | 164 | 376 | 376 | 0.011 | 0.153 | 0.050 | 0.148 | 0.153 | 0.067 | 0.115 | 0.197 | 0.279 | 0.141 | 0.134 | 0.098 | 0.226 |
GO Enrichment output for subnetwork 5683-7-real in each dataset
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.806E-16 | 1.335E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 6.663E-16 | 7.662E-13 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 9.931E-16 | 7.614E-13 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 9.931E-16 | 5.71E-13 |
positive regulation of ligase activity | GO:0051351 |  | 1.642E-15 | 7.552E-13 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.087E-15 | 8E-13 |
regulation of ligase activity | GO:0051340 |  | 3.303E-15 | 1.085E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 5.66E-15 | 1.627E-12 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.273E-11 | 5.808E-09 |
negative regulation of ligase activity | GO:0051352 |  | 2.519E-11 | 5.794E-09 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.907E-07 | 3.988E-05 |
IPC-NIBC-129 file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 2.336E-17 | 5.708E-14 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.642E-17 | 3.227E-14 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 3.778E-17 | 3.077E-14 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 3.778E-17 | 2.308E-14 |
positive regulation of ligase activity | GO:0051351 |  | 6.631E-17 | 3.24E-14 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 8.217E-17 | 3.346E-14 |
regulation of ligase activity | GO:0051340 |  | 1.371E-16 | 4.784E-14 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 3.193E-16 | 9.75E-14 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 1.892E-12 | 5.136E-10 |
negative regulation of ligase activity | GO:0051352 |  | 2.074E-12 | 5.068E-10 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.484E-08 | 7.738E-06 |
Ivshina_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.267E-17 | 7.86E-14 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 3.694E-17 | 4.444E-14 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.283E-17 | 4.237E-14 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.283E-17 | 3.178E-14 |
positive regulation of ligase activity | GO:0051351 |  | 9.272E-17 | 4.462E-14 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.149E-16 | 4.607E-14 |
regulation of ligase activity | GO:0051340 |  | 1.917E-16 | 6.588E-14 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 4.464E-16 | 1.343E-13 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.555E-12 | 6.831E-10 |
negative regulation of ligase activity | GO:0051352 |  | 2.802E-12 | 6.741E-10 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 4.374E-08 | 9.567E-06 |
Loi_GPL570 file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 2.336E-17 | 5.708E-14 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.642E-17 | 3.227E-14 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 3.778E-17 | 3.077E-14 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 3.778E-17 | 2.308E-14 |
positive regulation of ligase activity | GO:0051351 |  | 6.631E-17 | 3.24E-14 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 8.217E-17 | 3.346E-14 |
regulation of ligase activity | GO:0051340 |  | 1.371E-16 | 4.784E-14 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 3.193E-16 | 9.75E-14 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 1.892E-12 | 5.136E-10 |
negative regulation of ligase activity | GO:0051352 |  | 2.074E-12 | 5.068E-10 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.484E-08 | 7.738E-06 |
Loi_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.267E-17 | 7.86E-14 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 3.694E-17 | 4.444E-14 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.283E-17 | 4.237E-14 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.283E-17 | 3.178E-14 |
positive regulation of ligase activity | GO:0051351 |  | 9.272E-17 | 4.462E-14 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.149E-16 | 4.607E-14 |
regulation of ligase activity | GO:0051340 |  | 1.917E-16 | 6.588E-14 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 4.464E-16 | 1.343E-13 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.555E-12 | 6.831E-10 |
negative regulation of ligase activity | GO:0051352 |  | 2.802E-12 | 6.741E-10 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 4.374E-08 | 9.567E-06 |
Parker_GPL1390 file
Name | Accession Number | Link | P-val | Corrected P-val |
threonine-type endopeptidase activity | GO:0004298 |  | 5.047E-13 | 1.802E-09 |
proteasome core complex | GO:0005839 |  | 6.728E-13 | 1.201E-09 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 8.109E-13 | 9.653E-10 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.094E-12 | 9.769E-10 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 1.205E-12 | 8.608E-10 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 1.455E-12 | 8.662E-10 |
positive regulation of ligase activity | GO:0051351 |  | 1.748E-12 | 8.915E-10 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.276E-12 | 1.016E-09 |
regulation of ligase activity | GO:0051340 |  | 3.182E-12 | 1.262E-09 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 5.905E-12 | 2.109E-09 |
proteasome complex | GO:0000502 |  | 6.606E-11 | 2.144E-08 |
Parker_GPL887 file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 2.408E-15 | 8.785E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 3.407E-15 | 6.214E-12 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 4.253E-15 | 5.172E-12 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 4.74E-15 | 4.323E-12 |
positive regulation of ligase activity | GO:0051351 |  | 5.859E-15 | 4.275E-12 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 9.69E-15 | 5.891E-12 |
regulation of ligase activity | GO:0051340 |  | 1.289E-14 | 6.717E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 2.023E-14 | 9.225E-12 |
proteasome core complex | GO:0005839 |  | 4.789E-13 | 1.941E-10 |
threonine-type endopeptidase activity | GO:0004298 |  | 4.789E-13 | 1.747E-10 |
proteasome complex | GO:0000502 |  | 6.988E-11 | 2.318E-08 |
Pawitan_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 3.267E-17 | 7.86E-14 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 3.694E-17 | 4.444E-14 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 5.283E-17 | 4.237E-14 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 5.283E-17 | 3.178E-14 |
positive regulation of ligase activity | GO:0051351 |  | 9.272E-17 | 4.462E-14 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.149E-16 | 4.607E-14 |
regulation of ligase activity | GO:0051340 |  | 1.917E-16 | 6.588E-14 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 4.464E-16 | 1.343E-13 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.555E-12 | 6.831E-10 |
negative regulation of ligase activity | GO:0051352 |  | 2.802E-12 | 6.741E-10 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 4.374E-08 | 9.567E-06 |
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.806E-16 | 1.335E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 6.663E-16 | 7.662E-13 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 9.931E-16 | 7.614E-13 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 9.931E-16 | 5.71E-13 |
positive regulation of ligase activity | GO:0051351 |  | 1.642E-15 | 7.552E-13 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.087E-15 | 8E-13 |
regulation of ligase activity | GO:0051340 |  | 3.303E-15 | 1.085E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 5.66E-15 | 1.627E-12 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.273E-11 | 5.808E-09 |
negative regulation of ligase activity | GO:0051352 |  | 2.519E-11 | 5.794E-09 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.907E-07 | 3.988E-05 |
Sotiriou file
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.806E-16 | 1.335E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 6.663E-16 | 7.662E-13 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 9.931E-16 | 7.614E-13 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 9.931E-16 | 5.71E-13 |
positive regulation of ligase activity | GO:0051351 |  | 1.642E-15 | 7.552E-13 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.087E-15 | 8E-13 |
regulation of ligase activity | GO:0051340 |  | 3.303E-15 | 1.085E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 5.66E-15 | 1.627E-12 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.273E-11 | 5.808E-09 |
negative regulation of ligase activity | GO:0051352 |  | 2.519E-11 | 5.794E-09 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.907E-07 | 3.988E-05 |
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.806E-16 | 1.335E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 6.663E-16 | 7.662E-13 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 9.931E-16 | 7.614E-13 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 9.931E-16 | 5.71E-13 |
positive regulation of ligase activity | GO:0051351 |  | 1.642E-15 | 7.552E-13 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.087E-15 | 8E-13 |
regulation of ligase activity | GO:0051340 |  | 3.303E-15 | 1.085E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 5.66E-15 | 1.627E-12 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.273E-11 | 5.808E-09 |
negative regulation of ligase activity | GO:0051352 |  | 2.519E-11 | 5.794E-09 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.907E-07 | 3.988E-05 |
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 5.806E-16 | 1.335E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 6.663E-16 | 7.662E-13 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 9.931E-16 | 7.614E-13 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 9.931E-16 | 5.71E-13 |
positive regulation of ligase activity | GO:0051351 |  | 1.642E-15 | 7.552E-13 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 2.087E-15 | 8E-13 |
regulation of ligase activity | GO:0051340 |  | 3.303E-15 | 1.085E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 5.66E-15 | 1.627E-12 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 2.273E-11 | 5.808E-09 |
negative regulation of ligase activity | GO:0051352 |  | 2.519E-11 | 5.794E-09 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.907E-07 | 3.988E-05 |
Name | Accession Number | Link | P-val | Corrected P-val |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 1.864E-15 | 4.423E-12 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 3.057E-15 | 3.627E-12 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 4.345E-15 | 3.437E-12 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 4.345E-15 | 2.578E-12 |
positive regulation of ligase activity | GO:0051351 |  | 6.084E-15 | 2.888E-12 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 8.403E-15 | 3.323E-12 |
regulation of ligase activity | GO:0051340 |  | 1.146E-14 | 3.885E-12 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 1.545E-14 | 4.582E-12 |
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051436 |  | 5.522E-11 | 1.456E-08 |
negative regulation of ligase activity | GO:0051352 |  | 6.062E-11 | 1.438E-08 |
detection of mechanical stimulus | GO:0050982 |  | 6.526E-10 | 1.408E-07 |