Study run-a1

Study informations

119 subnetworks in total page | file

406 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 4331-5-real

score

DatasetScoreP-val 1P-val 2P-val 3
Desmedt0.15699.310e-031.112e-029.391e-02
IPC-NIBC-1290.25235.240e-026.691e-024.665e-01
Ivshina_GPL96-GPL970.25181.640e-022.403e-023.498e-01
Loi_GPL5700.21975.960e-025.918e-022.897e-01
Loi_GPL96-GPL970.17106.000e-053.180e-041.069e-03
Parker_GPL13900.25491.774e-011.850e-016.968e-01
Parker_GPL8870.12125.757e-016.070e-016.209e-01
Pawitan_GPL96-GPL970.35471.318e-011.007e-016.074e-01
Schmidt0.21311.036e-021.478e-021.344e-01
Sotiriou0.31303.012e-039.150e-047.125e-02
Wang0.19409.270e-026.295e-023.478e-01
Zhang0.24418.562e-025.439e-022.092e-01
Zhou0.40176.449e-026.854e-023.954e-01

Expression data for subnetwork 4331-5-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |

Subnetwork structure for each dataset

Score for each gene in subnetwork 4331-5-real in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPC-NIBC-129Ivshina_GPL96-GPL97Loi_GPL570Loi_GPL96-GPL97Parker_GPL1390Parker_GPL887Pawitan_GPL96-GPL97SchmidtSotiriouWangZhangZhou
mybl2MYBL2 on ITI MYBL2 on NCBI37944440.1620.2370.1660.0790.1240.1840.3330.2750.2020.1820.1200.0740.245
cdkn1aCDKN1A on ITI CDKN1A on NCBI70373510.115-0.0200.0650.0820.0990.1240.0550.0870.0680.1440.015-0.2010.069
tle1TLE1 on ITI TLE1 on NCBI23978600.0620.235-0.032-0.1770.0330.0850.3390.0680.126-0.027-0.0280.0680.025
ccnb1CCNB1 on ITI CCNB1 on NCBI36778590.0820.2460.2120.2240.2560.0990.1260.3510.1290.2490.1520.1670.398
cdk7CDK7 on ITI CDK7 on NCBI2104185179-0.1020.1210.1160.1260.1700.008-0.1350.090-0.0850.182-0.0230.0210.168
ccnd1CCND1 on ITI CCND1 on NCBI1022120.127-0.1830.0620.1900.157-0.002-0.1900.105-0.1070.1740.1060.1440.290
cks2CKS2 on ITI CKS2 on NCBI44673540.0500.2330.1700.1030.1860.1720.0930.1670.2630.1510.1450.2840.383
cdc2CDC2 on ITI CDC2 on NCBI1031110.0730.2470.2060.1720.2470.153-0.1310.2820.2260.2210.0670.2970.336
map4MAP4 on ITI MAP4 on NCBI161373550.0020.0460.067-0.0430.0340.1190.159-0.058-0.0200.0430.108-0.0740.302
mnat1MNAT1 on ITI MNAT1 on NCBI379175162-0.0110.0830.0750.3050.1050.111-0.0090.1070.118-0.0020.1440.3070.086

GO Enrichment output for subnetwork 4331-5-real in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.387E-115.489E-08
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.959E-062.253E-03
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.959E-061.502E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.065E-061.762E-03
interphaseGO:0051325GO:0051325 on GO3.36E-061.546E-03
response to calcium ionGO:0051592GO:0051592 on GO1.434E-055.498E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.787E-055.873E-03
response to UVGO:0009411GO:0009411 on GO2.194E-056.306E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO2.341E-055.983E-03
RNA elongationGO:0006354GO:0006354 on GO2.656E-056.109E-03
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO2.876E-056.013E-03


IPC-NIBC-129 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO4.753E-121.161E-08
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO7.671E-079.37E-04
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO9.952E-078.104E-04
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.057E-066.457E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO6.496E-063.174E-03
response to calcium ionGO:0051592GO:0051592 on GO7.872E-063.205E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO9.428E-063.29E-03
response to UVGO:0009411GO:0009411 on GO1.117E-053.412E-03
RNA elongationGO:0006354GO:0006354 on GO1.18E-053.203E-03
nucleotide-excision repairGO:0006289GO:0006289 on GO1.245E-053.041E-03
DNA catabolic processGO:0006308GO:0006308 on GO1.454E-053.228E-03


Ivshina_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.006E-112.42E-08
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.124E-061.353E-03
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.458E-061.17E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.542E-069.275E-04
interphaseGO:0051325GO:0051325 on GO1.746E-068.404E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO9.506E-063.812E-03
response to calcium ionGO:0051592GO:0051592 on GO1.015E-053.488E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO1.3E-053.91E-03
response to UVGO:0009411GO:0009411 on GO1.461E-053.905E-03
RNA elongationGO:0006354GO:0006354 on GO1.634E-053.932E-03
nucleotide-excision repairGO:0006289GO:0006289 on GO1.726E-053.774E-03


Loi_GPL570 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO4.753E-121.161E-08
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO7.671E-079.37E-04
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO9.952E-078.104E-04
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.057E-066.457E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO6.496E-063.174E-03
response to calcium ionGO:0051592GO:0051592 on GO7.872E-063.205E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO9.428E-063.29E-03
response to UVGO:0009411GO:0009411 on GO1.117E-053.412E-03
RNA elongationGO:0006354GO:0006354 on GO1.18E-053.203E-03
nucleotide-excision repairGO:0006289GO:0006289 on GO1.245E-053.041E-03
DNA catabolic processGO:0006308GO:0006308 on GO1.454E-053.228E-03


Loi_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.006E-112.42E-08
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.124E-061.353E-03
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.458E-061.17E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.542E-069.275E-04
interphaseGO:0051325GO:0051325 on GO1.746E-068.404E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO9.506E-063.812E-03
response to calcium ionGO:0051592GO:0051592 on GO1.015E-053.488E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO1.3E-053.91E-03
response to UVGO:0009411GO:0009411 on GO1.461E-053.905E-03
RNA elongationGO:0006354GO:0006354 on GO1.634E-053.932E-03
nucleotide-excision repairGO:0006289GO:0006289 on GO1.726E-053.774E-03


Parker_GPL1390 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.327E-138.309E-10
cyclin-dependent protein kinase regulator activityGO:0016538GO:0016538 on GO3.522E-116.289E-08
cyclin-dependent protein kinase holoenzyme complexGO:0000307GO:0000307 on GO1.259E-081.498E-05
protein kinase regulator activityGO:0019887GO:0019887 on GO6.666E-085.951E-05
kinase regulator activityGO:0019207GO:0019207 on GO1.414E-071.01E-04
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.523E-079.066E-05
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.824E-079.306E-05
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO3.959E-071.767E-04
response to calcium ionGO:0051592GO:0051592 on GO1.457E-065.78E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO3.366E-061.202E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO3.366E-061.093E-03


Parker_GPL887 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.379E-135.03E-10
cyclin-dependent protein kinase regulator activityGO:0016538GO:0016538 on GO6.438E-111.174E-07
RNA polymerase II carboxy-terminal domain kinase activityGO:0008353GO:0008353 on GO1.508E-091.834E-06
cyclin-dependent protein kinase holoenzyme complexGO:0000307GO:0000307 on GO8.439E-097.696E-06
protein kinase regulator activityGO:0019887GO:0019887 on GO4.564E-083.33E-05
kinase regulator activityGO:0019207GO:0019207 on GO8.1E-084.925E-05
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO8.417E-084.387E-05
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.049E-074.783E-05
interphaseGO:0051325GO:0051325 on GO1.158E-074.693E-05
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.996E-077.281E-05
cyclin-dependent protein kinase activityGO:0004693GO:0004693 on GO4.381E-071.453E-04


Pawitan_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.006E-112.42E-08
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.124E-061.353E-03
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.458E-061.17E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.542E-069.275E-04
interphaseGO:0051325GO:0051325 on GO1.746E-068.404E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO9.506E-063.812E-03
response to calcium ionGO:0051592GO:0051592 on GO1.015E-053.488E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO1.3E-053.91E-03
response to UVGO:0009411GO:0009411 on GO1.461E-053.905E-03
RNA elongationGO:0006354GO:0006354 on GO1.634E-053.932E-03
nucleotide-excision repairGO:0006289GO:0006289 on GO1.726E-053.774E-03


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.387E-115.489E-08
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.959E-062.253E-03
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.959E-061.502E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.065E-061.762E-03
interphaseGO:0051325GO:0051325 on GO3.36E-061.546E-03
response to calcium ionGO:0051592GO:0051592 on GO1.434E-055.498E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.787E-055.873E-03
response to UVGO:0009411GO:0009411 on GO2.194E-056.306E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO2.341E-055.983E-03
RNA elongationGO:0006354GO:0006354 on GO2.656E-056.109E-03
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO2.876E-056.013E-03


Sotiriou file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.387E-115.489E-08
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.959E-062.253E-03
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.959E-061.502E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.065E-061.762E-03
interphaseGO:0051325GO:0051325 on GO3.36E-061.546E-03
response to calcium ionGO:0051592GO:0051592 on GO1.434E-055.498E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.787E-055.873E-03
response to UVGO:0009411GO:0009411 on GO2.194E-056.306E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO2.341E-055.983E-03
RNA elongationGO:0006354GO:0006354 on GO2.656E-056.109E-03
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO2.876E-056.013E-03


Wang file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.387E-115.489E-08
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.959E-062.253E-03
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.959E-061.502E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.065E-061.762E-03
interphaseGO:0051325GO:0051325 on GO3.36E-061.546E-03
response to calcium ionGO:0051592GO:0051592 on GO1.434E-055.498E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.787E-055.873E-03
response to UVGO:0009411GO:0009411 on GO2.194E-056.306E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO2.341E-055.983E-03
RNA elongationGO:0006354GO:0006354 on GO2.656E-056.109E-03
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO2.876E-056.013E-03


Zhang file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO2.387E-115.489E-08
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.959E-062.253E-03
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.959E-061.502E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.065E-061.762E-03
interphaseGO:0051325GO:0051325 on GO3.36E-061.546E-03
response to calcium ionGO:0051592GO:0051592 on GO1.434E-055.498E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.787E-055.873E-03
response to UVGO:0009411GO:0009411 on GO2.194E-056.306E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO2.341E-055.983E-03
RNA elongationGO:0006354GO:0006354 on GO2.656E-056.109E-03
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO2.876E-056.013E-03


Zhou file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.407E-113.339E-08
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO1.333E-061.582E-03
nucleotide-excision repair. DNA damage removalGO:0000718GO:0000718 on GO1.542E-061.22E-03
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.931E-061.146E-03
interphaseGO:0051325GO:0051325 on GO2.116E-061.004E-03
response to calcium ionGO:0051592GO:0051592 on GO1.219E-054.819E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.307E-054.43E-03
response to UVGO:0009411GO:0009411 on GO1.597E-054.736E-03
RNA elongation from RNA polymerase II promoterGO:0006368GO:0006368 on GO1.812E-054.777E-03
RNA elongationGO:0006354GO:0006354 on GO2.045E-054.853E-03
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO2.223E-054.795E-03


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