Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 4291-5-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.2189 | 1.704e-02 | 2.042e-02 | 1.466e-01 |
|---|
| IPC-NIBC-129 | 0.2445 | 1.657e-02 | 1.937e-02 | 1.920e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2223 | 1.694e-02 | 2.473e-02 | 3.560e-01 |
|---|
| Loi_GPL570 | 0.2182 | 6.628e-02 | 6.583e-02 | 3.125e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1744 | 0.000e+00 | 4.000e-06 | 1.000e-06 |
|---|
| Parker_GPL1390 | 0.3375 | 7.543e-02 | 7.331e-02 | 4.699e-01 |
|---|
| Parker_GPL887 | 0.1349 | 5.310e-01 | 5.639e-01 | 5.707e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3633 | 8.799e-02 | 6.304e-02 | 4.789e-01 |
|---|
| Schmidt | 0.2830 | 3.403e-03 | 5.083e-03 | 5.454e-02 |
|---|
| Sotiriou | 0.3805 | 2.710e-03 | 8.010e-04 | 6.605e-02 |
|---|
| Wang | 0.1126 | 8.788e-02 | 5.914e-02 | 3.357e-01 |
|---|
| Zhang | 0.2836 | 2.695e-01 | 2.143e-01 | 5.401e-01 |
|---|
| Zhou | 0.4080 | 5.944e-02 | 6.267e-02 | 3.691e-01 |
|---|
Expression data for subnetwork 4291-5-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 4291-5-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
|---|
| racgap1 |   | 1 | 164 | 88 | 106 | 0.181 | 0.240 | 0.218 | 0.126 | 0.242 | 0.125 | 0.092 | 0.313 | 0.238 | 0.255 | 0.264 | 0.234 | 0.356 |
|---|
| mlf1 | | 5 | 50 | 53 | 47 | 0.027 | 0.224 | 0.053 | 0.047 | 0.169 | 0.128 | 0.021 | -0.028 | 0.106 | 0.176 | 0.126 | 0.098 | 0.141 |
|---|
| cttn | | 9 | 27 | 44 | 37 | 0.067 | 0.065 | 0.123 | 0.238 | 0.126 | 0.263 | -0.172 | 0.216 | 0.069 | 0.115 | 0.129 | 0.025 | 0.279 |
|---|
| cdkn1a | | 70 | 3 | 73 | 51 | 0.115 | -0.020 | 0.065 | 0.082 | 0.099 | 0.124 | 0.055 | 0.087 | 0.068 | 0.144 | 0.015 | -0.201 | 0.069 |
|---|
| tle1 | | 23 | 9 | 78 | 60 | 0.062 | 0.235 | -0.032 | -0.177 | 0.033 | 0.085 | 0.339 | 0.068 | 0.126 | -0.027 | -0.028 | 0.068 | 0.025 |
|---|
| mlf1ip | | 5 | 50 | 53 | 47 | 0.182 | 0.147 | 0.186 | 0.144 | 0.242 | 0.266 | 0.005 | 0.345 | 0.182 | 0.197 | 0.172 | 0.240 | 0.372 |
|---|
| kif23 | | 1 | 164 | 88 | 106 | 0.068 | 0.197 | 0.069 | 0.192 | 0.117 | 0.180 | 0.112 | 0.311 | 0.230 | 0.130 | 0.110 | 0.070 | 0.390 |
|---|
| ywhaz | | 11 | 21 | 31 | 20 | 0.124 | 0.089 | 0.087 | 0.200 | 0.141 | 0.110 | 0.228 | 0.199 | 0.056 | 0.123 | -0.026 | 0.103 | 0.213 |
|---|
| fhod1 | | 3 | 79 | 88 | 86 | 0.050 | 0.216 | 0.126 | -0.110 | 0.073 | 0.134 | -0.082 | 0.094 | -0.080 | -0.013 | 0.046 | 0.075 | 0.207 |
|---|
| prkci | | 12 | 20 | 31 | 19 | 0.065 | 0.104 | 0.012 | 0.170 | 0.112 | 0.088 | -0.103 | -0.170 | 0.196 | 0.128 | -0.054 | 0.124 | 0.149 |
|---|
| ccnd1 | | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
|---|
| cdc2 | | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
|---|
| hras | | 7 | 38 | 88 | 75 | 0.049 | -0.030 | 0.094 | 0.210 | 0.160 | 0.195 | 0.022 | 0.245 | 0.086 | 0.208 | 0.001 | 0.003 | 0.197 |
|---|
| gabbr1 | | 6 | 43 | 88 | 77 | 0.003 | -0.016 | -0.022 | -0.051 | 0.082 | 0.119 | 0.584 | -0.082 | 0.049 | 0.057 | 0.011 | 0.096 | 0.116 |
|---|
| acta1 | | 6 | 43 | 44 | 40 | -0.003 | 0.098 | -0.008 | -0.030 | 0.119 | 0.174 | 0.376 | 0.024 | 0.182 | 0.214 | -0.013 | 0.048 | 0.201 |
|---|
| grb2 | | 9 | 27 | 1 | 4 | 0.084 | -0.013 | 0.086 | -0.031 | 0.162 | -0.038 | 0.003 | 0.065 | 0.158 | 0.127 | -0.097 | 0.194 | -0.005 |
|---|
GO Enrichment output for subnetwork 4291-5-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 |  | 5.037E-08 | 1.158E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 8.251E-07 | 9.488E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.783E-06 | 2.134E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 5.639E-06 | 3.243E-03 |
|---|
| sperm motility | GO:0030317 | | 9.964E-06 | 4.583E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.788E-05 | 6.854E-03 |
|---|
| response to light stimulus | GO:0009416 | | 2.398E-05 | 7.879E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.418E-05 | 6.953E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 2.657E-05 | 6.79E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 2.911E-05 | 6.695E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 3.033E-05 | 6.342E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 1.126E-08 | 2.75E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 3.2E-07 | 3.909E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 6.252E-07 | 5.091E-04 |
|---|
| gamma-aminobutyric acid signaling pathway | GO:0007214 | | 1.479E-06 | 9.036E-04 |
|---|
| osteoblast differentiation | GO:0001649 | | 2.882E-06 | 1.408E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 2.882E-06 | 1.173E-03 |
|---|
| sperm motility | GO:0030317 | | 3.625E-06 | 1.265E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 5.473E-06 | 1.671E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 7.855E-06 | 2.132E-03 |
|---|
| negative regulation of adenylate cyclase activity | GO:0007194 | | 8.542E-06 | 2.087E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 8.542E-06 | 1.897E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 1.85E-08 | 4.451E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.254E-07 | 6.32E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.026E-06 | 8.229E-04 |
|---|
| gamma-aminobutyric acid signaling pathway | GO:0007214 | | 2.081E-06 | 1.252E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.683E-06 | 1.772E-03 |
|---|
| sperm motility | GO:0030317 | | 4.181E-06 | 1.677E-03 |
|---|
| osteoblast differentiation | GO:0001649 | | 4.181E-06 | 1.437E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 8.962E-06 | 2.695E-03 |
|---|
| negative regulation of adenylate cyclase activity | GO:0007194 | | 1.286E-05 | 3.437E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.286E-05 | 3.093E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 1.398E-05 | 3.057E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 1.126E-08 | 2.75E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 3.2E-07 | 3.909E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 6.252E-07 | 5.091E-04 |
|---|
| gamma-aminobutyric acid signaling pathway | GO:0007214 | | 1.479E-06 | 9.036E-04 |
|---|
| osteoblast differentiation | GO:0001649 | | 2.882E-06 | 1.408E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 2.882E-06 | 1.173E-03 |
|---|
| sperm motility | GO:0030317 | | 3.625E-06 | 1.265E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 5.473E-06 | 1.671E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 7.855E-06 | 2.132E-03 |
|---|
| negative regulation of adenylate cyclase activity | GO:0007194 | | 8.542E-06 | 2.087E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 8.542E-06 | 1.897E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 1.85E-08 | 4.451E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.254E-07 | 6.32E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.026E-06 | 8.229E-04 |
|---|
| gamma-aminobutyric acid signaling pathway | GO:0007214 | | 2.081E-06 | 1.252E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.683E-06 | 1.772E-03 |
|---|
| sperm motility | GO:0030317 | | 4.181E-06 | 1.677E-03 |
|---|
| osteoblast differentiation | GO:0001649 | | 4.181E-06 | 1.437E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 8.962E-06 | 2.695E-03 |
|---|
| negative regulation of adenylate cyclase activity | GO:0007194 | | 1.286E-05 | 3.437E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.286E-05 | 3.093E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 1.398E-05 | 3.057E-03 |
|---|
Parker_GPL1390 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 5.864E-08 | 2.094E-04 |
|---|
| cyclin-dependent protein kinase regulator activity | GO:0016538 | | 1.724E-07 | 3.079E-04 |
|---|
| actomyosin structure organization | GO:0031032 | | 3.025E-06 | 3.6E-03 |
|---|
| striated muscle cell differentiation | GO:0051146 | | 4.636E-06 | 4.139E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.104E-05 | 7.881E-03 |
|---|
| alpha-tubulin binding | GO:0043014 | | 1.104E-05 | 6.568E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.55E-05 | 7.908E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.654E-05 | 7.384E-03 |
|---|
| insulin receptor substrate binding | GO:0043560 | | 1.654E-05 | 6.564E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.654E-05 | 5.907E-03 |
|---|
| regulation of Rac protein signal transduction | GO:0035020 | | 1.654E-05 | 5.37E-03 |
|---|
Parker_GPL887 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 4.168E-08 | 1.52E-04 |
|---|
| cyclin-dependent protein kinase regulator activity | GO:0016538 | | 2.699E-07 | 4.923E-04 |
|---|
| actomyosin structure organization | GO:0031032 | | 1.136E-06 | 1.382E-03 |
|---|
| spindle | GO:0005819 | | 1.586E-06 | 1.446E-03 |
|---|
| response to light stimulus | GO:0009416 | | 2.215E-06 | 1.616E-03 |
|---|
| striated muscle cell differentiation | GO:0051146 | | 2.685E-06 | 1.633E-03 |
|---|
| muscle thin filament assembly | GO:0030240 | | 8.717E-06 | 4.543E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 8.717E-06 | 3.975E-03 |
|---|
| RNA polymerase II carboxy-terminal domain kinase activity | GO:0008353 | | 8.717E-06 | 3.533E-03 |
|---|
| epidermal growth factor receptor binding | GO:0005154 | | 8.717E-06 | 3.18E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 8.993E-06 | 2.982E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 1.85E-08 | 4.451E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 5.254E-07 | 6.32E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.026E-06 | 8.229E-04 |
|---|
| gamma-aminobutyric acid signaling pathway | GO:0007214 | | 2.081E-06 | 1.252E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 3.683E-06 | 1.772E-03 |
|---|
| sperm motility | GO:0030317 | | 4.181E-06 | 1.677E-03 |
|---|
| osteoblast differentiation | GO:0001649 | | 4.181E-06 | 1.437E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 8.962E-06 | 2.695E-03 |
|---|
| negative regulation of adenylate cyclase activity | GO:0007194 | | 1.286E-05 | 3.437E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.286E-05 | 3.093E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 1.398E-05 | 3.057E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 5.037E-08 | 1.158E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 8.251E-07 | 9.488E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.783E-06 | 2.134E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 5.639E-06 | 3.243E-03 |
|---|
| sperm motility | GO:0030317 | | 9.964E-06 | 4.583E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.788E-05 | 6.854E-03 |
|---|
| response to light stimulus | GO:0009416 | | 2.398E-05 | 7.879E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.418E-05 | 6.953E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 2.657E-05 | 6.79E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 2.911E-05 | 6.695E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 3.033E-05 | 6.342E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 5.037E-08 | 1.158E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 8.251E-07 | 9.488E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.783E-06 | 2.134E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 5.639E-06 | 3.243E-03 |
|---|
| sperm motility | GO:0030317 | | 9.964E-06 | 4.583E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.788E-05 | 6.854E-03 |
|---|
| response to light stimulus | GO:0009416 | | 2.398E-05 | 7.879E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.418E-05 | 6.953E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 2.657E-05 | 6.79E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 2.911E-05 | 6.695E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 3.033E-05 | 6.342E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 5.037E-08 | 1.158E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 8.251E-07 | 9.488E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.783E-06 | 2.134E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 5.639E-06 | 3.243E-03 |
|---|
| sperm motility | GO:0030317 | | 9.964E-06 | 4.583E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.788E-05 | 6.854E-03 |
|---|
| response to light stimulus | GO:0009416 | | 2.398E-05 | 7.879E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.418E-05 | 6.953E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 2.657E-05 | 6.79E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 2.911E-05 | 6.695E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 3.033E-05 | 6.342E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 5.037E-08 | 1.158E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 8.251E-07 | 9.488E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.783E-06 | 2.134E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 5.639E-06 | 3.243E-03 |
|---|
| sperm motility | GO:0030317 | | 9.964E-06 | 4.583E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.788E-05 | 6.854E-03 |
|---|
| response to light stimulus | GO:0009416 | | 2.398E-05 | 7.879E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.418E-05 | 6.953E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 2.657E-05 | 6.79E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 2.911E-05 | 6.695E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 3.033E-05 | 6.342E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.422E-08 | 8.12E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 7.473E-07 | 8.866E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 2.298E-06 | 1.817E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 5.176E-06 | 3.071E-03 |
|---|
| sperm motility | GO:0030317 | | 8.702E-06 | 4.13E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.496E-05 | 5.918E-03 |
|---|
| actomyosin structure organization | GO:0031032 | | 1.986E-05 | 6.732E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.986E-05 | 5.891E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.345E-05 | 6.182E-03 |
|---|
| establishment of apical/basal cell polarity | GO:0035089 | | 2.345E-05 | 5.564E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 2.57E-05 | 5.545E-03 |
|---|
