Study run-a1

Study informations

119 subnetworks in total page | file

406 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 2810-3-real

score

DatasetScoreP-val 1P-val 2P-val 3
Desmedt0.22486.346e-037.559e-037.015e-02
IPC-NIBC-1290.31453.995e-025.012e-023.878e-01
Ivshina_GPL96-GPL970.27035.280e-041.093e-033.317e-02
Loi_GPL5700.37892.521e-022.498e-021.504e-01
Loi_GPL96-GPL970.14589.000e-065.700e-056.100e-05
Parker_GPL13900.27456.936e-026.689e-024.499e-01
Parker_GPL8870.30781.757e-012.039e-011.632e-01
Pawitan_GPL96-GPL970.41014.792e-014.455e-019.623e-01
Schmidt0.24126.984e-031.013e-029.859e-02
Sotiriou0.33702.840e-038.500e-046.832e-02
Wang0.18851.389e-011.010e-014.503e-01
Zhang0.10969.268e-025.980e-022.246e-01
Zhou0.40523.788e-023.817e-022.442e-01

Expression data for subnetwork 2810-3-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |

Subnetwork structure for each dataset

Score for each gene in subnetwork 2810-3-real in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPC-NIBC-129Ivshina_GPL96-GPL97Loi_GPL570Loi_GPL96-GPL97Parker_GPL1390Parker_GPL887Pawitan_GPL96-GPL97SchmidtSotiriouWangZhangZhou
ppp2r5dPPP2R5D on ITI PPP2R5D on NCBI37917220.0980.0400.0570.2700.0920.2370.2990.2410.0170.1030.0330.0480.162
agtpbp1AGTPBP1 on ITI AGTPBP1 on NCBI112117130.0860.2190.0090.1810.0710.0780.2960.0260.1100.1510.1030.0640.226
stmn2STMN2 on ITI STMN2 on NCBI298130.0570.1060.0050.0520.1100.071-0.0990.0060.0340.1030.0750.113-0.039
cycsCYCS on ITI CYCS on NCBI102517140.0730.2060.0800.0940.117-0.0560.2020.2720.1570.0770.1900.1350.234
baxBAX on ITI BAX on NCBI92717150.0290.1850.2330.1920.088-0.0430.1840.1720.1750.019-0.0940.0410.235
vdac1VDAC1 on ITI VDAC1 on NCBI11642956-0.0100.1320.0840.1990.1450.0050.0370.273-0.0970.171-0.047-0.0630.144
ppfia1PPFIA1 on ITI PPFIA1 on NCBI83317160.1640.0800.1490.2690.1510.2140.0930.2250.0360.1760.1530.1270.272
tcf3TCF3 on ITI TCF3 on NCBI3791722-0.0120.2820.0550.0450.0370.1760.3180.0060.094-0.0560.0400.0010.167
hspb1HSPB1 on ITI HSPB1 on NCBI191117110.190-0.0500.1840.2120.231-0.026-0.0650.289-0.0210.2010.125-0.0770.290
cdc2CDC2 on ITI CDC2 on NCBI1031110.0730.2470.2060.1720.2470.153-0.1310.2820.2260.2210.0670.2970.336
mapkapk2MAPKAPK2 on ITI MAPKAPK2 on NCBI13191712-0.0500.1020.156-0.1160.0900.1680.3030.0740.1710.1170.085-0.1240.312
sfnSFN on ITI SFN on NCBI50429170.0770.1370.1110.1720.1120.1190.1410.2190.1000.1470.0250.0790.181

GO Enrichment output for subnetwork 2810-3-real in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
B cell lineage commitmentGO:0002326GO:0002326 on GO1.145E-072.634E-04
regulation of caspase activityGO:0043281GO:0043281 on GO2.864E-063.294E-03
regulation of endopeptidase activityGO:0052548GO:0052548 on GO3.236E-062.481E-03
regulation of peptidase activityGO:0052547GO:0052547 on GO4.32E-062.484E-03
B cell differentiationGO:0030183GO:0030183 on GO3.125E-050.01437287
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO3.433E-050.01315802
activation of caspase activityGO:0006919GO:0006919 on GO3.891E-050.01278403
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO4.801E-050.01380275
positive regulation of caspase activityGO:0043280GO:0043280 on GO5.425E-050.01386384
keratinocyte proliferationGO:0043616GO:0043616 on GO6.395E-050.01470891
B cell activationGO:0042113GO:0042113 on GO1.346E-040.02814964


IPC-NIBC-129 file

NameAccession NumberLinkP-valCorrected P-val
regulation of caspase activityGO:0043281GO:0043281 on GO3.893E-099.511E-06
regulation of endopeptidase activityGO:0052548GO:0052548 on GO4.767E-095.823E-06
regulation of peptidase activityGO:0052547GO:0052547 on GO6.565E-095.346E-06
B cell lineage commitmentGO:0002326GO:0002326 on GO1.705E-081.041E-05
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO2.727E-081.332E-05
activation of caspase activityGO:0006919GO:0006919 on GO8.016E-083.264E-05
positive regulation of caspase activityGO:0043280GO:0043280 on GO1.369E-074.779E-05
DNA fragmentation involved in apoptosisGO:0006309GO:0006309 on GO3.295E-071.006E-04
cell structure disassembly during apoptosisGO:0006921GO:0006921 on GO6.43E-071.745E-04
apoptotic nuclear changesGO:0030262GO:0030262 on GO7.441E-071.818E-04
DNA catabolic process. endonucleolyticGO:0000737GO:0000737 on GO9.769E-072.17E-04


Ivshina_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of caspase activityGO:0043281GO:0043281 on GO9.222E-092.219E-05
regulation of endopeptidase activityGO:0052548GO:0052548 on GO1.06E-081.276E-05
regulation of peptidase activityGO:0052547GO:0052547 on GO1.478E-081.186E-05
B cell lineage commitmentGO:0002326GO:0002326 on GO3.113E-081.872E-05
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO4.978E-082.395E-05
activation of caspase activityGO:0006919GO:0006919 on GO1.509E-076.052E-05
positive regulation of caspase activityGO:0043280GO:0043280 on GO2.633E-079.049E-05
DNA fragmentation involved in apoptosisGO:0006309GO:0006309 on GO6.008E-071.807E-04
cell structure disassembly during apoptosisGO:0006921GO:0006921 on GO1.172E-063.133E-04
apoptotic nuclear changesGO:0030262GO:0030262 on GO1.356E-063.263E-04
DNA catabolic process. endonucleolyticGO:0000737GO:0000737 on GO1.78E-063.893E-04


Loi_GPL570 file

NameAccession NumberLinkP-valCorrected P-val
regulation of caspase activityGO:0043281GO:0043281 on GO3.893E-099.511E-06
regulation of endopeptidase activityGO:0052548GO:0052548 on GO4.767E-095.823E-06
regulation of peptidase activityGO:0052547GO:0052547 on GO6.565E-095.346E-06
B cell lineage commitmentGO:0002326GO:0002326 on GO1.705E-081.041E-05
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO2.727E-081.332E-05
activation of caspase activityGO:0006919GO:0006919 on GO8.016E-083.264E-05
positive regulation of caspase activityGO:0043280GO:0043280 on GO1.369E-074.779E-05
DNA fragmentation involved in apoptosisGO:0006309GO:0006309 on GO3.295E-071.006E-04
cell structure disassembly during apoptosisGO:0006921GO:0006921 on GO6.43E-071.745E-04
apoptotic nuclear changesGO:0030262GO:0030262 on GO7.441E-071.818E-04
DNA catabolic process. endonucleolyticGO:0000737GO:0000737 on GO9.769E-072.17E-04


Loi_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of caspase activityGO:0043281GO:0043281 on GO9.222E-092.219E-05
regulation of endopeptidase activityGO:0052548GO:0052548 on GO1.06E-081.276E-05
regulation of peptidase activityGO:0052547GO:0052547 on GO1.478E-081.186E-05
B cell lineage commitmentGO:0002326GO:0002326 on GO3.113E-081.872E-05
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO4.978E-082.395E-05
activation of caspase activityGO:0006919GO:0006919 on GO1.509E-076.052E-05
positive regulation of caspase activityGO:0043280GO:0043280 on GO2.633E-079.049E-05
DNA fragmentation involved in apoptosisGO:0006309GO:0006309 on GO6.008E-071.807E-04
cell structure disassembly during apoptosisGO:0006921GO:0006921 on GO1.172E-063.133E-04
apoptotic nuclear changesGO:0030262GO:0030262 on GO1.356E-063.263E-04
DNA catabolic process. endonucleolyticGO:0000737GO:0000737 on GO1.78E-063.893E-04


Parker_GPL1390 file

NameAccession NumberLinkP-valCorrected P-val
regulation of caspase activityGO:0043281GO:0043281 on GO1.258E-074.493E-04
regulation of endopeptidase activityGO:0052548GO:0052548 on GO1.418E-072.532E-04
regulation of peptidase activityGO:0052547GO:0052547 on GO1.884E-072.242E-04
protein phosphatase type 2A complexGO:0000159GO:0000159 on GO2.511E-072.241E-04
protein serine/threonine phosphatase complexGO:0008287GO:0008287 on GO2E-061.428E-03
activation of caspase activityGO:0006919GO:0006919 on GO4.618E-062.748E-03
bHLH transcription factor bindingGO:0043425GO:0043425 on GO5.061E-062.582E-03
positive regulation of caspase activityGO:0043280GO:0043280 on GO6.706E-062.993E-03
B cell lineage commitmentGO:0002326GO:0002326 on GO7.589E-063.011E-03
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO1.062E-053.792E-03
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO1.062E-053.448E-03


Parker_GPL887 file

NameAccession NumberLinkP-valCorrected P-val
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO1.454E-085.304E-05
regulation of caspase activityGO:0043281GO:0043281 on GO1.267E-072.312E-04
release of cytochrome c from mitochondriaGO:0001836GO:0001836 on GO1.507E-071.833E-04
regulation of endopeptidase activityGO:0052548GO:0052548 on GO1.546E-071.41E-04
regulation of peptidase activityGO:0052547GO:0052547 on GO1.986E-071.449E-04
DNA fragmentation involved in apoptosisGO:0006309GO:0006309 on GO2.316E-071.408E-04
protein phosphatase type 2A complexGO:0000159GO:0000159 on GO2.811E-071.465E-04
cell structure disassembly during apoptosisGO:0006921GO:0006921 on GO4.706E-072.146E-04
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO5.488E-072.224E-04
apoptotic nuclear changesGO:0030262GO:0030262 on GO5.488E-072.002E-04
DNA catabolic process. endonucleolyticGO:0000737GO:0000737 on GO6.351E-072.106E-04


Pawitan_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of caspase activityGO:0043281GO:0043281 on GO9.222E-092.219E-05
regulation of endopeptidase activityGO:0052548GO:0052548 on GO1.06E-081.276E-05
regulation of peptidase activityGO:0052547GO:0052547 on GO1.478E-081.186E-05
B cell lineage commitmentGO:0002326GO:0002326 on GO3.113E-081.872E-05
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO4.978E-082.395E-05
activation of caspase activityGO:0006919GO:0006919 on GO1.509E-076.052E-05
positive regulation of caspase activityGO:0043280GO:0043280 on GO2.633E-079.049E-05
DNA fragmentation involved in apoptosisGO:0006309GO:0006309 on GO6.008E-071.807E-04
cell structure disassembly during apoptosisGO:0006921GO:0006921 on GO1.172E-063.133E-04
apoptotic nuclear changesGO:0030262GO:0030262 on GO1.356E-063.263E-04
DNA catabolic process. endonucleolyticGO:0000737GO:0000737 on GO1.78E-063.893E-04


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
B cell lineage commitmentGO:0002326GO:0002326 on GO1.145E-072.634E-04
regulation of caspase activityGO:0043281GO:0043281 on GO2.864E-063.294E-03
regulation of endopeptidase activityGO:0052548GO:0052548 on GO3.236E-062.481E-03
regulation of peptidase activityGO:0052547GO:0052547 on GO4.32E-062.484E-03
B cell differentiationGO:0030183GO:0030183 on GO3.125E-050.01437287
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO3.433E-050.01315802
activation of caspase activityGO:0006919GO:0006919 on GO3.891E-050.01278403
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO4.801E-050.01380275
positive regulation of caspase activityGO:0043280GO:0043280 on GO5.425E-050.01386384
keratinocyte proliferationGO:0043616GO:0043616 on GO6.395E-050.01470891
B cell activationGO:0042113GO:0042113 on GO1.346E-040.02814964


Sotiriou file

NameAccession NumberLinkP-valCorrected P-val
B cell lineage commitmentGO:0002326GO:0002326 on GO1.145E-072.634E-04
regulation of caspase activityGO:0043281GO:0043281 on GO2.864E-063.294E-03
regulation of endopeptidase activityGO:0052548GO:0052548 on GO3.236E-062.481E-03
regulation of peptidase activityGO:0052547GO:0052547 on GO4.32E-062.484E-03
B cell differentiationGO:0030183GO:0030183 on GO3.125E-050.01437287
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO3.433E-050.01315802
activation of caspase activityGO:0006919GO:0006919 on GO3.891E-050.01278403
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO4.801E-050.01380275
positive regulation of caspase activityGO:0043280GO:0043280 on GO5.425E-050.01386384
keratinocyte proliferationGO:0043616GO:0043616 on GO6.395E-050.01470891
B cell activationGO:0042113GO:0042113 on GO1.346E-040.02814964


Wang file

NameAccession NumberLinkP-valCorrected P-val
B cell lineage commitmentGO:0002326GO:0002326 on GO1.145E-072.634E-04
regulation of caspase activityGO:0043281GO:0043281 on GO2.864E-063.294E-03
regulation of endopeptidase activityGO:0052548GO:0052548 on GO3.236E-062.481E-03
regulation of peptidase activityGO:0052547GO:0052547 on GO4.32E-062.484E-03
B cell differentiationGO:0030183GO:0030183 on GO3.125E-050.01437287
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO3.433E-050.01315802
activation of caspase activityGO:0006919GO:0006919 on GO3.891E-050.01278403
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO4.801E-050.01380275
positive regulation of caspase activityGO:0043280GO:0043280 on GO5.425E-050.01386384
keratinocyte proliferationGO:0043616GO:0043616 on GO6.395E-050.01470891
B cell activationGO:0042113GO:0042113 on GO1.346E-040.02814964


Zhang file

NameAccession NumberLinkP-valCorrected P-val
B cell lineage commitmentGO:0002326GO:0002326 on GO1.145E-072.634E-04
regulation of caspase activityGO:0043281GO:0043281 on GO2.864E-063.294E-03
regulation of endopeptidase activityGO:0052548GO:0052548 on GO3.236E-062.481E-03
regulation of peptidase activityGO:0052547GO:0052547 on GO4.32E-062.484E-03
B cell differentiationGO:0030183GO:0030183 on GO3.125E-050.01437287
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO3.433E-050.01315802
activation of caspase activityGO:0006919GO:0006919 on GO3.891E-050.01278403
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO4.801E-050.01380275
positive regulation of caspase activityGO:0043280GO:0043280 on GO5.425E-050.01386384
keratinocyte proliferationGO:0043616GO:0043616 on GO6.395E-050.01470891
B cell activationGO:0042113GO:0042113 on GO1.346E-040.02814964


Zhou file

NameAccession NumberLinkP-valCorrected P-val
B cell lineage commitmentGO:0002326GO:0002326 on GO1.195E-072.836E-04
regulation of caspase activityGO:0043281GO:0043281 on GO3.668E-064.352E-03
regulation of endopeptidase activityGO:0052548GO:0052548 on GO4.121E-063.26E-03
regulation of peptidase activityGO:0052547GO:0052547 on GO5.433E-063.223E-03
B cell differentiationGO:0030183GO:0030183 on GO3.258E-050.0154628
activation of caspase activity by cytochrome cGO:0008635GO:0008635 on GO3.513E-050.01389539
regulation of protein homodimerization activityGO:0043496GO:0043496 on GO4.914E-050.01665826
activation of caspase activityGO:0006919GO:0006919 on GO4.974E-050.01475479
keratinocyte proliferationGO:0043616GO:0043616 on GO6.546E-050.01725845
positive regulation of caspase activityGO:0043280GO:0043280 on GO6.788E-050.01610813
B cell activationGO:0042113GO:0042113 on GO1.468E-040.03167246


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